ENSGALG00000019961


Gallus gallus

Features
Gene ID: ENSGALG00000019961
  
Biological name :SLC18B1
  
Synonyms : SLC18B1 / solute carrier family 18 member B1
  
Possible biological names infered from orthology : D3Z5L6 / Mus musculus solute carrier family 18, subfamily B, member 1 (Slc18b1), transcript variant 2, mRNA. / Q6NT16
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 56971068
Gene end: 56984939
  
Corresponding Affymetrix probe sets: Gga.10290.1.S1_at (Chicken Array)   Gga.1910.1.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000031127
Ensembl peptide - ENSGALP00000064155
NCBI entrez gene - 421699     See in Manteia.
RefSeq - NM_001277913
RefSeq - XM_015284106
RefSeq Peptide - NP_001264842
swissprot - E1C5U8
swissprot - A0A1L1RZ62
Ensembl - ENSGALG00000019961
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc18b1ENSDARG00000044047Danio rerio
 Q6NT16ENSG00000146409Homo sapiens
 D3Z5L6ENSMUSG00000037455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SLC18A1 / solute carrier family 18 member A1 / P54219* / Q8R090* / Chromaffin granule amine transporter *ENSGALG0000000169320
ENSGALG0000000928919
SLC18A3 / vesicular acetylcholine transporter / Q16572* / solute carrier family 18 member A3*ENSGALG0000004110319


Protein motifs (from Interpro)
Interpro ID Name
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0022857 transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr