ENSDARG00000044047


Danio rerio

Features
Gene ID: ENSDARG00000044047
  
Biological name :slc18b1
  
Synonyms : slc18b1 / solute carrier family 18, subfamily B, member 1
  
Possible biological names infered from orthology : D3Z5L6 / Mus musculus solute carrier family 18, subfamily B, member 1 (Slc18b1), transcript variant 2, mRNA. / Q6NT16 / solute carrier family 18 member B1
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 8211992
Gene end: 8228712
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000064664
Ensembl peptide - ENSDARP00000122674
NCBI entrez gene - 550539     See in Manteia.
RefSeq - NM_001017841
RefSeq Peptide - NP_001017841
swissprot - F1QX10
swissprot - E9QG57
ZFIN ID - ZDB-GENE-050417-386
Ensembl - ENSDARG00000044047
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC18B1ENSGALG00000019961Gallus gallus
 Q6NT16ENSG00000146409Homo sapiens
 D3Z5L6ENSMUSG00000037455Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q08C75 / slc18a3a / solute carrier family 18 (vesicular acetylcholine transporter), member 3a / Q16572* / SLC18A3* / solute carrier family 18 member A3*ENSDARG0000000635621
slc18a2 / solute carrier family 18 (vesicular monoamine transporter), member 2ENSDARG0000001511019
BX088696.1 / P54219* / SLC18A1* / solute carrier family 18 member A1*ENSDARG0000007815717
CABZ01112647.1 / Q16572* / SLC18A3* / solute carrier family 18 member A3*ENSDARG0000010752717


Protein motifs (from Interpro)
Interpro ID Name
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr