ENSDARG00000078157


Danio rerio

Features
Gene ID: ENSDARG00000078157
  
Biological name :BX088696.1
  
Synonyms : BX088696.1
  
Possible biological names infered from orthology : Chromaffin granule amine transporter / P54219 / Q8R090 / SLC18A1 / solute carrier family 18 member A1
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 45708567
Gene end: 45729758
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000100785
Ensembl peptide - ENSDARP00000144684
Ensembl peptide - ENSDARP00000152909
Ensembl peptide - ENSDARP00000157227
swissprot - F1RCW5
Ensembl - ENSDARG00000078157
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLC18A1ENSGALG00000001693Gallus gallus
 P54219ENSG00000036565Homo sapiens
 Q8R090ENSMUSG00000036330Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
slc18a2 / solute carrier family 18 (vesicular monoamine transporter), member 2ENSDARG0000001511055
Q08C75 / slc18a3a / solute carrier family 18 (vesicular acetylcholine transporter), member 3a / Q16572* / SLC18A3* / solute carrier family 18 member A3*ENSDARG0000000635632
CABZ01112647.1 / Q16572* / SLC18A3* / solute carrier family 18 member A3*ENSDARG0000010752725
slc18b1 / solute carrier family 18, subfamily B, member 1 / Q6NT16* / D3Z5L6* / solute carrier family 18 member B1* / Mus musculus solute carrier family 18, subfamily B, member 1 (Slc18b1),...ENSDARG0000004404713


Protein motifs (from Interpro)
Interpro ID Name
 IPR011701  Major facilitator superfamily
 IPR020846  Major facilitator superfamily domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006837 serotonin transport IEA
 biological_processGO:0015842 aminergic neurotransmitter loading into synaptic vesicle IBA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0098793 presynapse IEA
 molecular_functionGO:0015222 serotonin transmembrane transporter activity IBA


Pathways (from Reactome)
Pathway description
Na+/Cl- dependent neurotransmitter transporters


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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