ENSGALG00000020741


Gallus gallus

Features
Gene ID: ENSGALG00000020741
  
Biological name :HPS6
  
Synonyms : HPS6 / HPS6, biogenesis of lysosomal organelles complex 2 subunit 3
  
Possible biological names infered from orthology : Hermansky-Pudlak syndrome 6 protein homolog / Q86YV9 / Q8BLY7
  
Species: Gallus gallus
  
Chr. number: 6
Strand: -1
Band:
Gene start: 22537516
Gene end: 22539975
  
Corresponding Affymetrix probe sets: Gga.18388.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000032578
NCBI entrez gene - 770328     See in Manteia.
RefSeq - XM_015288784
swissprot - E1C2Y8
Ensembl - ENSGALG00000020741
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HPS6ENSG00000166189Homo sapiens
 Hps6ENSMUSG00000074811Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017218  BLOC-2 complex, Hps6 subunit


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006996 organelle organization IEA
 biological_processGO:0007596 blood coagulation IEA
 biological_processGO:0030318 melanocyte differentiation IEA
 biological_processGO:0032418 lysosome localization IEA
 biological_processGO:0043473 pigmentation IEA
 biological_processGO:0072657 protein localization to membrane IEA
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0031084 BLOC-2 complex IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA
 molecular_functionGO:0030742 GTP-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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