ENSGALG00000021542


Gallus gallus

Features
Gene ID: ENSGALG00000021542
  
Biological name :SNCB
  
Synonyms : SNCB / synuclein beta
  
Possible biological names infered from orthology : Beta-synuclein / Q16143 / Q91ZZ3
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 10351272
Gene end: 10354618
  
Corresponding Affymetrix probe sets: Gga.203.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040085
Ensembl peptide - ENSGALP00000063039
NCBI entrez gene - 395391     See in Manteia.
RefSeq - NM_204671
RefSeq - XM_015293731
RefSeq Peptide - NP_990002
swissprot - Q9I9G9
Ensembl - ENSGALG00000021542
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sncbENSDARG00000104945Danio rerio
 SNCBENSG00000074317Homo sapiens
 SncbENSMUSG00000034891Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SNCA / synuclein alpha / O55042* / P37840* / Alpha-synuclein *ENSGALG0000001037958
SNCG / synuclein gamma / O76070* / Q9Z0F7*ENSGALG0000000201553


Protein motifs (from Interpro)
Interpro ID Name
 IPR001058  Synuclein
 IPR002461  Beta-synuclein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007268 chemical synaptic transmission IEA
 biological_processGO:0042417 dopamine metabolic process IEA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0050808 synapse organization IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0016234 inclusion body IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046914 transition metal ion binding IEA
 molecular_functionGO:1903136 cuprous ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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