ENSGALG00000023335


Gallus gallus

Features
Gene ID: ENSGALG00000023335
  
Biological name :RCHY1
  
Synonyms : RCHY1 / ring finger and CHY zinc finger domain containing 1
  
Possible biological names infered from orthology : Q96PM5 / Q9CR50
  
Species: Gallus gallus
  
Chr. number: 4
Strand: 1
Band:
Gene start: 34858221
Gene end: 34863084
  
Corresponding Affymetrix probe sets: Gga.16650.1.S1_at (Chicken Array)   Gga.2430.1.S1_s_at (Chicken Array)   GgaAffx.23496.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000037629
Ensembl peptide - ENSGALP00000048656
NCBI entrez gene - 771726     See in Manteia.
RefSeq - XM_015276333
RefSeq - NM_001080888
RefSeq Peptide - NP_001074357
swissprot - Q5ZJC3
swissprot - F1P5N8
Ensembl - ENSGALG00000023335
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rchy1ENSDARG00000016710Danio rerio
 RCHY1ENSG00000163743Homo sapiens
 Rchy1ENSMUSG00000029397Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR008913  Zinc finger, CHY-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017921  Zinc finger, CTCHY-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0031398 positive regulation of protein ubiquitination IEA
 biological_processGO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
 cellular_componentGO:0000151 ubiquitin ligase complex IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0002039 p53 binding IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
Translesion Synthesis by POLH
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000037716 UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62984* / P62987* / Gm5239* / Gm11808* / predicted gene 11808*  / reaction
 ENSGALG00000010317 POLH / DNA polymerase eta / Q9JJN0* / Q9Y253*  / complex / reaction
 ENSGALG00000036790 P79781 / RPS27A / Ubiquitin-40S ribosomal protein S27a Ubiquitin 40S ribosomal protein S27a / P62983* / P62979* / AL136454.1* / ribosomal protein S27a*  / reaction






 

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