ENSGALG00000027234


Gallus gallus

Features
Gene ID: ENSGALG00000027234
  
Biological name :HOXA13
  
Synonyms : homeobox protein Hox-A13 / HOXA13
  
Possible biological names infered from orthology : homeobox A13 / P31271
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 32738288
Gene end: 32739767
  
Corresponding Affymetrix probe sets: Gga.76.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043198
NCBI entrez gene - 373934     See in Manteia.
RefSeq - NM_204139
RefSeq Peptide - NP_989470
swissprot - R4GRV9
Ensembl - ENSGALG00000027234
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 P79724ENSDARG00000036254Danio rerio
 Q6W990ENSDARG00000100312Danio rerio
 HOXA13ENSG00000106031Homo sapiens
 Hoxa13ENSMUSG00000038203Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXC13 / homeobox C13 / P31276* / P50207* / Homeobox protein Hox-C13 *ENSGALG0000003608254
HOXD13 / homeobox protein Hox-D13 / P35453* / P70217* / homeobox D13*ENSGALG0000003203949
HOXB13 / homeobox B13 / P70321* / Q92826* / Homeobox protein Hox-B13 *ENSGALG0000003315443
HOXA11 / P31258 / Homeobox protein Hox-A11 / P31311* / P31270* / homeobox A11*ENSGALG0000004002121
HOXC11 / homeobox C11 / O43248* / P31313* / Homeobox protein Hox-C11 *ENSGALG0000004241621
HOXD12 / P24343 / Homeobox protein Hox-D12 / P23812* / P35452* / homeobox D12*ENSGALG0000000927420
HOXA10 / homeobox A10 / P31260* / P31310* / Homeobox protein Hox-A10 *ENSGALG0000002663120
HOXC10 / homeobox C10 / P31257* / Q9NYD6* / Homeobox protein Hox-C10 *ENSGALG0000002939320
HOXC9 / homeobox C9 / P09633* / P31274* / Homeobox protein Hox-C9 *ENSGALG0000002943920
HOXB9 / homeobox B9 / P17482* / P20615* / Homeobox protein Hox-B9 *ENSGALG0000000127619
HOXD10 / homeobox D10 / P28358* / P28359* / Homeobox protein Hox-D10 *ENSGALG0000000927019
HOXA9 / P31269* / P09631* / AC004080.3* / homeobox A9* / Homeobox protein Hox-A9 *ENSGALG0000002898319
HOXD11 / P24342 / Homeobox protein Hox-D11 / P31277* / homeobox D11*ENSGALG0000003962919
HOXD9 / homeobox D9 / P28356* / P28357* / Homeobox protein Hox-D9 *ENSGALG0000002751318
HOXC12 / homeobox C12 / P31275* / Q8K5B8* / Homeobox protein Hox-C12 *ENSGALG0000003327213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR022067  Homeobox protein Hox1A3 N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr