ENSGALG00000027513


Gallus gallus

Features
Gene ID: ENSGALG00000027513
  
Biological name :HOXD9
  
Synonyms : homeobox D9 / HOXD9
  
Possible biological names infered from orthology : Homeobox protein Hox-D9 / P28356 / P28357
  
Species: Gallus gallus
  
Chr. number: 7
Strand: -1
Band:
Gene start: 16362036
Gene end: 16363342
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000029264
NCBI entrez gene - 771214     See in Manteia.
RefSeq - XM_001234506
swissprot - E1C676
Ensembl - ENSGALG00000027513
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HOXD9ENSG00000128709Homo sapiens
 Hoxd9ENSMUSG00000043342Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HOXC9 / homeobox C9 / P09633* / P31274* / Homeobox protein Hox-C9 *ENSGALG0000002943947
HOXA9 / P31269* / P09631* / AC004080.3* / homeobox A9* / Homeobox protein Hox-A9 *ENSGALG0000002898341
HOXB9 / homeobox B9 / P17482* / P20615* / Homeobox protein Hox-B9 *ENSGALG0000000127640
HOXA10 / homeobox A10 / P31260* / P31310* / Homeobox protein Hox-A10 *ENSGALG0000002663130
HOXC10 / homeobox C10 / P31257* / Q9NYD6* / Homeobox protein Hox-C10 *ENSGALG0000002939328
HOXD10 / homeobox D10 / P28358* / P28359* / Homeobox protein Hox-D10 *ENSGALG0000000927025
HOXD12 / P24343 / Homeobox protein Hox-D12 / P23812* / P35452* / homeobox D12*ENSGALG0000000927421
HOXA11 / P31258 / Homeobox protein Hox-A11 / P31311* / P31270* / homeobox A11*ENSGALG0000004002121
HOXC11 / homeobox C11 / O43248* / P31313* / Homeobox protein Hox-C11 *ENSGALG0000004241621
HOXD11 / P24342 / Homeobox protein Hox-D11 / P31277* / homeobox D11*ENSGALG0000003962920
HOXA13 / homeobox protein Hox-A13 / P31271* / homeobox A13*ENSGALG0000002723418
HOXD13 / homeobox protein Hox-D13 / P35453* / P70217* / homeobox D13*ENSGALG0000003203918
HOXC13 / homeobox C13 / P31276* / P50207* / Homeobox protein Hox-C13 *ENSGALG0000003608217
HOXB13 / homeobox B13 / P70321* / Q92826* / Homeobox protein Hox-B13 *ENSGALG0000003315416
HOXC12 / homeobox C12 / P31275* / Q8K5B8* / Homeobox protein Hox-C12 *ENSGALG0000003327215


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR006711  Hox9, N-terminal activation domain
 IPR009057  Homeobox-like domain superfamily
 IPR017112  Homeobox protein HXA9/HXB9/HXC9
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007338 single fertilization IEA
 biological_processGO:0007519 skeletal muscle tissue development IEA
 biological_processGO:0008344 adult locomotory behavior IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0009954 proximal/distal pattern formation IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0030879 mammary gland development IEA
 biological_processGO:0035115 embryonic forelimb morphogenesis IEA
 biological_processGO:0035136 forelimb morphogenesis IEA
 biological_processGO:0035137 hindlimb morphogenesis IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048704 embryonic skeletal system morphogenesis IEA
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:0048935 peripheral nervous system neuron development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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