ENSGALG00000028341


Gallus gallus

Features
Gene ID: ENSGALG00000028341
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : MADCAM1 / mucosal vascular addressin cell adhesion molecule 1 / Mus musculus mucosal vascular addressin cell adhesion molecule 1 (Madcam1), transcript variant 2, mRNA. / Q13477 / Q61826
  
Species: Gallus gallus
  
Chr. number: 28
Strand: 1
Band:
Gene start: 2684354
Gene end: 2687041
  
Corresponding Affymetrix probe sets: Gga.11642.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000040905
NCBI entrez gene - 100858236     See in Manteia.
RefSeq - XM_003642866
swissprot - R4GFV0
Ensembl - ENSGALG00000028341
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q13477ENSG00000099866Homo sapiens
 Q61826ENSMUSG00000020310Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013768  Intercellular adhesion molecule, N-terminal
 IPR013783  Immunoglobulin-like fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002687 positive regulation of leukocyte migration IBA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion IEA
 biological_processGO:0007229 integrin-mediated signaling pathway IBA
 biological_processGO:0034113 heterotypic cell-cell adhesion IBA
 biological_processGO:0050901 leukocyte tethering or rolling IBA
 biological_processGO:2000403 positive regulation of lymphocyte migration IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0098640 integrin binding involved in cell-matrix adhesion IBA


Pathways (from Reactome)
Pathway description
Immunoregulatory interactions between a Lymphoid and a non-Lymphoid cell


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr