ENSGALG00000028998


Gallus gallus

Features
Gene ID: ENSGALG00000028998
  
Biological name :XPA
  
Synonyms : XPA / XPA, DNA damage recognition and repair factor
  
Possible biological names infered from orthology : P23025 / Q64267 / xeroderma pigmentosum, complementation group A
  
Species: Gallus gallus
  
Chr. number: Z
Strand: 1
Band:
Gene start: 70731207
Gene end: 70737921
  
Corresponding Affymetrix probe sets: Gga.3310.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047806
Ensembl peptide - ENSGALP00000064705
Ensembl peptide - ENSGALP00000058854
Ensembl peptide - ENSGALP00000056113
Ensembl peptide - ENSGALP00000051883
Ensembl peptide - ENSGALP00000042402
NCBI entrez gene - 395659     See in Manteia.
RefSeq - NM_204853
RefSeq Peptide - NP_990184
swissprot - A0A1D5PGG1
swissprot - A0A1L1S0Q3
swissprot - R4GJS9
swissprot - A0A1D5P541
swissprot - A0A1L1RJD5
Ensembl - ENSGALG00000028998
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 xpaENSDARG00000038114Danio rerio
 XPAENSG00000136936Homo sapiens
 XpaENSMUSG00000028329Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000465  XPA
 IPR009061  Putative DNA-binding domain superfamily
 IPR022652  Zinc finger, XPA-type, conserved site
 IPR022656  XPA, C-terminal
 IPR022658  XPA, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006289 nucleotide-excision repair IEA
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IEA
 biological_processGO:0009411 response to UV IEA
 biological_processGO:0009636 response to toxic substance IEA
 biological_processGO:0009650 UV protection IEA
 biological_processGO:0033683 nucleotide-excision repair, DNA incision IEA
 biological_processGO:0034504 protein localization to nucleus IEA
 biological_processGO:0035264 multicellular organism growth IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005662 DNA replication factor A complex IEA
 cellular_componentGO:0045171 intercellular bridge IEA
 molecular_functionGO:0003684 damaged DNA binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
Formation of Incision Complex in GG-NER
Dual Incision in GG-NER
Formation of TC-NER Pre-Incision Complex
Dual incision in TC-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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