ENSGALG00000030991


Gallus gallus

Features
Gene ID: ENSGALG00000030991
  
Biological name :IRX1
  
Synonyms : iroquois-class homeodomain protein IRX-1 / IRX1
  
Possible biological names infered from orthology : iroquois homeobox 1 / P78414 / P81068
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 87405530
Gene end: 87410670
  
Corresponding Affymetrix probe sets: Gga.2699.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047540
Ensembl peptide - ENSGALP00000055830
NCBI entrez gene - 374185     See in Manteia.
RefSeq - NM_001030338
RefSeq - XM_015282367
RefSeq Peptide - NP_001025509
swissprot - A0A1D5PSE4
swissprot - A0A1D5P4D2
Ensembl - ENSGALG00000030991
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 irx1aENSDARG00000101831Danio rerio
 IRX1ENSG00000170549Homo sapiens
 Irx1ENSMUSG00000060969Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IRX3 / iroquois homeobox 3 / P78415* / P81067* / Iroquois-class homeodomain protein IRX-3 *ENSGALG0000004204533
IRX2 / iroquois homeobox 2 / P81066* / Q9BZI1* / Iroquois-class homeodomain protein IRX-2 *ENSGALG0000001319330
IRX4 / Q9YGS0 / Iroquois-class homeodomain protein IRX-4 / P78413* / Q9QY61* / iroquois homeobox 4*ENSGALG0000002289628
IRX5 / iroquois homeobox 5 / P78411* / Q9JKQ4* / Iroquois-class homeodomain protein IRX-5 *ENSGALG0000000358822
IRX6 / iroquois homeobox 6 / P78412* / Q9ER75* / Iroquois-class homeodomain protein IRX-6 *ENSGALG0000002373822
MKX / mohawk homeobox / Q8IYA7*ENSGALG0000000742615


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003893  Iroquois-class homeodomain protein
 IPR008422  Homeobox KN domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001656 metanephros development IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0072086 specification of loop of Henle identity IEA
 biological_processGO:0072272 proximal/distal pattern formation involved in metanephric nephron development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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