ENSGALG00000031120


Gallus gallus

Features
Gene ID: ENSGALG00000031120
  
Biological name :HNRNPH2
  
Synonyms : heterogeneous nuclear ribonucleoprotein H / HNRNPH2
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein F / heterogeneous nuclear ribonucleoprotein H1 / heterogeneous nuclear ribonucleoprotein H2 / Heteroous nuclear ribonucleoprotein F Heteroous nuclear ribonucleoprotein F, N-terminally processed / Heteroous nuclear ribonucleoprotein H2 Heteroous nuclear ribonucleoprotein H2, N-terminally processed / HNRNPF / HNRNPH1 / Mus musculus heteroous nuclear ribonucleoprotein H1 (Hnrnph1), transcript variant 1, mRNA. / O35737 / P31943 / P52597 / P55795 / P70333 / Q9Z2X1
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 13577397
Gene end: 13594676
  
Corresponding Affymetrix probe sets: Gga.10969.1.S1_at (Chicken Array)   Gga.4880.1.S1_s_at (Chicken Array)   GgaAffx.11592.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000046754
Ensembl peptide - ENSGALP00000063876
Ensembl peptide - ENSGALP00000063242
Ensembl peptide - ENSGALP00000063052
Ensembl peptide - ENSGALP00000063011
Ensembl peptide - ENSGALP00000062719
Ensembl peptide - ENSGALP00000060772
Ensembl peptide - ENSGALP00000059058
Ensembl peptide - ENSGALP00000056458
Ensembl peptide - ENSGALP00000054978
Ensembl peptide - ENSGALP00000050919
Ensembl peptide - ENSGALP00000045256
NCBI entrez gene - 395157     See in Manteia.
RefSeq - XM_015293730
RefSeq - NM_204496
RefSeq - XM_015293722
RefSeq - XM_015293723
RefSeq - XM_015293725
RefSeq - XM_015293726
RefSeq - XM_015293727
RefSeq - XM_015293728
RefSeq - XM_015293729
RefSeq Peptide - NP_989827
swissprot - A0A1L1RWN1
swissprot - A0A1L1RW44
swissprot - A0A1L1RW05
swissprot - A0A1L1RV66
swissprot - A0A1L1RPQ5
swissprot - A0A1D5PU56
swissprot - A0A1D5PQ19
swissprot - A0A1D5PDS3
swissprot - A0A1D5NY02
swissprot - A0A1D5P259
Ensembl - ENSGALG00000031120
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnph1ENSDARG00000040881Danio rerio
 hnrnph1lENSDARG00000005551Danio rerio
 HNRNPFENSG00000169813Homo sapiens
 P31943ENSG00000169045Homo sapiens
 P55795ENSG00000126945Homo sapiens
 HnrnpfENSMUSG00000042079Mus musculus
 O35737ENSMUSG00000007850Mus musculus
 P70333ENSMUSG00000045427Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNRNPH3 / heterogeneous nuclear ribonucleoprotein H3 / P31942* / Mus musculus heteroous nuclear ribonucleoprotein H3 (Hnrnph3), transcript variant 3, mRNA.*ENSGALG0000000394743
ESRP2 / Q5ZLR4 / Epithelial splicing regulatory protein 2 / Q8K0G8* / Q9H6T0*ENSGALG0000000337423
ESRP1 / epithelial splicing regulatory protein 1 / Q3US41* / Q6NXG1* / Mus musculus epithelial splicing regulatory protein 1 (Esrp1), transcript variant 3, mRNA.*ENSGALG0000003107622
RBM12 / RNA binding motif protein 12 / Q8R4X3* / Q9NTZ6* / RNA-binding protein 12 *ENSGALG0000003025318
RBM12B / RNA binding motif protein 12B / Q66JV4* / Q80YR9* / Q8IXT5* / Rbm12b1* / Rbm12b2* / RNA-binding protein 12B-A * / Mus musculus RNA binding motif protein 12 B2 (Rbm12b2), transcript...ENSGALG0000003512918
GRSF1* / Q12849* / Q8C5Q4* / G-rich sequence factor 1 * / G-rich RNA sequence binding factor 1*ENSGALG000000311608
GRSF1* / Q12849* / Q8C5Q4* / G-rich sequence factor 1 * / G-rich RNA sequence binding factor 1*ENSGALG000000402326


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR012996  Zinc finger, CHHC-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
FGFR2 alternative splicing
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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