ENSGALG00000032840


Gallus gallus

Features
Gene ID: ENSGALG00000032840
  
Biological name :LYST
  
Synonyms : lysosomal trafficking regulator / LYST
  
Possible biological names infered from orthology : Q99698
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 38083880
Gene end: 38144189
  
Corresponding Affymetrix probe sets: GgaAffx.25295.1.S1_at (Chicken Array)   GgaAffx.6954.1.S1_at (Chicken Array)   GgaAffx.6956.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000044842
Ensembl peptide - ENSGALP00000049628
NCBI entrez gene - 421514     See in Manteia.
RefSeq - XM_015284416
RefSeq - XM_015284417
RefSeq - XM_015284418
RefSeq - XM_015284419
swissprot - A0A1D5PA68
swissprot - A0A1D5NWU9
Ensembl - ENSGALG00000032840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lystENSDARG00000008575Danio rerio
 LYSTENSG00000143669Homo sapiens
 LystENSMUSG00000019726Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
NBEAL2 / neurobeachin like 2 / Q6ZNJ1* / Q6ZQA0* / Neurobeachin-like protein 2 *ENSGALG0000003912015
WDFY4 / WDFY family member 4 / Q6ZS81* / WD repeat and FYVE domain containing 4*ENSGALG0000000616514
NBEAL1 / neurobeachin like 1 / Q6ZS30*ENSGALG0000000878614
LRBA / LPS responsive beige-like anchor protein / P50851*ENSGALG0000001006112
NBEA* / Q8NFP9* / Q9EPN1* / neurobeachin*ENSGALG000000170628
WDR81 / WD repeat domain 81 / Q562E7* / Q5ND34*ENSGALG000000268226
NSMAF / neutral sphingomyelinase activation associated factor / O35242* / Q92636* / neutral sphingomyelinase (N-SMase) activation associated factor*ENSGALG000000388386
ENSGALG000000436693
NBEA* / Q8NFP9* / Q9EPN1* / neurobeachin*ENSGALG000000455922


Protein motifs (from Interpro)
Interpro ID Name
 IPR000409  BEACH domain
 IPR001680  WD40 repeat
 IPR011993  PH-like domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR016024  Armadillo-type fold
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR023362  PH-BEACH domain
 IPR030464  Lysosomal-trafficking regulator


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007040 lysosome organization IEA
 biological_processGO:0032510 endosome to lysosome transport via multivesicular body sorting pathway IEA
 biological_processGO:0042267 natural killer cell mediated cytotoxicity IEA
 biological_processGO:0043473 pigmentation IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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