ENSDARG00000008575


Danio rerio

Features
Gene ID: ENSDARG00000008575
  
Biological name :lyst
  
Synonyms : lysosomal trafficking regulator / lyst
  
Possible biological names infered from orthology : Q99698
  
Species: Danio rerio
  
Chr. number: 13
Strand: -1
Band:
Gene start: 49867268
Gene end: 50002852
  
Corresponding Affymetrix probe sets: Dr.16565.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000090212
swissprot - E9QFZ1
ZFIN ID - ZDB-GENE-070702-1
Ensembl - ENSDARG00000008575
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LYSTENSGALG00000032840Gallus gallus
 LYSTENSG00000143669Homo sapiens
 LystENSMUSG00000019726Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nbeaa / neurobeachin a / NBEA* / Q9EPN1* / Q8NFP9* / neurobeachin*ENSDARG0000007008017
wdfy3 / WD repeat and FYVE domain containing 3 / Q6VNB8* / Q8IZQ1*ENSDARG0000007889017
nbeal2 / neurobeachin-like 2 / Q6ZNJ1* / Q6ZQA0* / Neurobeachin-like protein 2 *ENSDARG0000009864117
nbeab / neurobeachin b / NBEA* / Q9EPN1* / Q8NFP9* / neurobeachin*ENSDARG0000010518417
lrba / LPS-responsive vesicle trafficking, beach and anchor containing / P50851* / LPS responsive beige-like anchor protein*ENSDARG0000003110816
nbeal1 / neurobeachin-like 1 / Q6ZS30*ENSDARG0000009954716
nsmaf / neutral sphingomyelinase (N-SMase) activation associated factor / Q92636* / neutral sphingomyelinase activation associated factor*ENSDARG000000519208
wdfy4 / WDFY family member 4 / Q6ZS81* / WD repeat and FYVE domain containing 4*ENSDARG000000770098
wdr81 / E7FEV0 / WD repeat domain 81 / Q562E7* / Q5ND34*ENSDARG000000797027


Protein motifs (from Interpro)
Interpro ID Name
 IPR000409  BEACH domain
 IPR001680  WD40 repeat
 IPR011989  Armadillo-like helical
 IPR011993  PH-like domain superfamily
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR023362  PH-BEACH domain
 IPR030464  Lysosomal-trafficking regulator


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007040 lysosome organization IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000123 liver liver color , abnormal
liver increased size , abnormal
liver fatty , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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