ENSGALG00000033417


Gallus gallus

Features
Gene ID: ENSGALG00000033417
  
Biological name :SSPO
  
Synonyms : SCO-spondin precursor / SSPO
  
Possible biological names infered from orthology : Q8CG65 / SCO-spondin
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 406765
Gene end: 442882
  
Corresponding Affymetrix probe sets: GgaAffx.3062.1.S1_at (Chicken Array)   GgaAffx.3064.1.S1_at (Chicken Array)   GgaAffx.3064.2.S1_at (Chicken Array)   GgaAffx.8509.1.S1_at (Chicken Array)   GgaAffx.8528.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048147
Ensembl peptide - ENSGALP00000049482
NCBI entrez gene - 420367     See in Manteia.
RefSeq - NM_001006351
RefSeq Peptide - NP_001006351
swissprot - A0A1D5P9S4
swissprot - A0A1D5P623
Ensembl - ENSGALG00000033417
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 scospondinENSDARG00000067859Danio rerio
 SSPOENSG00000197558Homo sapiens
 SspoENSMUSG00000029797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ENSGALG0000003895012
VWF / Gallus gallus von Willebrand factor (VWF), mRNA. / P04275* / von Willebrand factor*ENSGALG0000001727211
OTOG / otogelin / Q6ZRI0*ENSGALG0000000620810
ovomucin precursor / MUC5B* / Q9HC84* / MUC5AC* / P98088* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSGALG0000000671710
OTOGL / otogelin like / F7A4A7* / Q3ZCN5* / Otogelin-like protein *ENSGALG0000001034210
MUC5B* / Q9HC84* / MUC5AC* / P98088* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSGALG000000317379
MUC6 / mucin 6, oligomeric mucus/gel-forming / Q6W4X9* / mucin-6 *ENSGALG000000405308
MUC5B* / Q9HC84* / MUC5AC* / P98088* / mucin 5B, oligomeric mucus/gel-forming* / mucin 5AC, oligomeric mucus/gel-forming*ENSGALG000000341447
TECTA / tectorin alpha / O08523* / O75443*ENSGALG000000408577
ZAN* / zonadhesin* / zonadhesin (gene/pseudogene)*ENSGALG000000413927
ENSGALG000000359145
ENSGALG000000410382
ENSGALG000000439732
ENSGALG000000461522


Protein motifs (from Interpro)
Interpro ID Name
 IPR000421  Coagulation factor 5/8 C-terminal domain
 IPR000742  EGF-like domain
 IPR000884  Thrombospondin type-1 (TSP1) repeat
 IPR001007  VWFC domain
 IPR001846  von Willebrand factor, type D domain
 IPR002172  Low-density lipoprotein (LDL) receptor class A repeat
 IPR002919  Trypsin Inhibitor-like, cysteine rich domain
 IPR006207  Cystine knot, C-terminal
 IPR008979  Galactose-binding-like domain superfamily
 IPR014853  Uncharacterised domain, cysteine-rich
 IPR023415  Low-density lipoprotein (LDL) receptor class A, conserved site
 IPR030119  SCO-spondin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0030154 cell differentiation IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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