ENSGALG00000034119


Gallus gallus

Features
Gene ID: ENSGALG00000034119
  
Biological name :COL15A1
  
Synonyms : COL15A1 / collagen type XV alpha 1 chain
  
Possible biological names infered from orthology : Collagen alpha-1(XV) chain Restin / O35206 / P39059
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 55990571
Gene end: 56094186
  
Corresponding Affymetrix probe sets: GgaAffx.7951.1.S1_at (Chicken Array)   GgaAffx.7996.1.S1_at (Chicken Array)   GgaAffx.8006.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049394
NCBI entrez gene - 420803     See in Manteia.
RefSeq - XM_004935077
RefSeq - XM_015275923
RefSeq - XM_004935078
RefSeq - XM_004935079
swissprot - A0A1D5P9J0
Ensembl - ENSGALG00000034119
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 col15a1bENSDARG00000061848Danio rerio
 P39059ENSG00000204291Homo sapiens
 O35206ENSMUSG00000028339Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
COL18A1 / collagen type XVIII alpha 1 chain / P39060* / P39061* / Collagen alpha-1(XVIII) chain Endostatin Non-collagenous domain 1*ENSGALG0000003831133


Protein motifs (from Interpro)
Interpro ID Name
 IPR001791  Laminin G domain
 IPR008160  Collagen triple helix repeat
 IPR010515  Collagenase NC10/endostatin
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0005581 collagen trimer IEA
 cellular_componentGO:0005615 extracellular space IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
Collagen degradation
Collagen biosynthesis and modifying enzymes
Assembly of collagen fibrils and other multimeric structures
Collagen chain trimerization


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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