ENSGALG00000034225


Gallus gallus

Features
Gene ID: ENSGALG00000034225
  
Biological name :DEAF1
  
Synonyms : DEAF1 / DEAF1, transcription factor
  
Possible biological names infered from orthology : Deformed epidermal autoregulatory factor 1 homolog / O75398 / Q9Z1T5
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 500596
Gene end: 519834
  
Corresponding Affymetrix probe sets: Gga.1385.1.S1_at (Chicken Array)   Gga.1385.2.S1_at (Chicken Array)   Gga.1385.2.S1_a_at (Chicken Array)   Gga.1385.3.S1_at (Chicken Array)   GgaAffx.26395.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056280
Ensembl peptide - ENSGALP00000061492
NCBI entrez gene - 423017     See in Manteia.
RefSeq - XM_015286218
RefSeq - NM_001137649
RefSeq - XM_015286216
RefSeq - XM_015286217
RefSeq Peptide - NP_001131121
swissprot - B6UV99
swissprot - A0A1L1RRQ7
Ensembl - ENSGALG00000034225
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 deaf1ENSDARG00000088844Danio rerio
 DEAF1ENSG00000177030Homo sapiens
 Deaf1ENSMUSG00000058886Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RUNX1T1 / protein CBFA2T1 isoform 2 / Q61909* / Q06455* / RUNX1 translocation partner 1* / runt-related transcription factor 1; translocated to, 1 (cyclin D-related)*ENSGALG0000003309117
CBFA2T3 / protein CBFA2T3 / O54972* / O75081* / CBFA2/RUNX1 translocation partner 3*ENSGALG0000003241016
CBFA2T2 / protein CBFA2T2 / O43439* / O70374* / CBFA2/RUNX1 translocation partner 2* / core-binding factor, runt domain, alpha subunit 2, translocated to, 2 (human)*ENSGALG0000000309614


Protein motifs (from Interpro)
Interpro ID Name
 IPR000770  SAND domain
 IPR002893  Zinc finger, MYND-type
 IPR010919  SAND-like domain superfamily
 IPR024119  Transcription factor DEAF-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0001662 behavioral fear response IEA
 biological_processGO:0001843 neural tube closure IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0008542 visual learning IEA
 biological_processGO:0033599 regulation of mammary gland epithelial cell proliferation IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0048706 embryonic skeletal system development IEA
 biological_processGO:2000026 regulation of multicellular organismal development IBA
 cellular_componentGO:0001650 fibrillar center IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005667 transcription factor complex IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0001227 transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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