ENSGALG00000034281


Gallus gallus

Features
Gene ID: ENSGALG00000034281
  
Biological name :TMCC2
  
Synonyms : TMCC2 / transmembrane and coiled-coil domain family 2
  
Possible biological names infered from orthology : O75069 / Q80W04 / transmembrane and coiled-coil domains 2
  
Species: Gallus gallus
  
Chr. number: 26
Strand: 1
Band:
Gene start: 2046833
Gene end: 2055562
  
Corresponding Affymetrix probe sets: Gga.15287.1.S1_at (Chicken Array)   Gga.16174.1.S1_at (Chicken Array)   GgaAffx.26657.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047534
Ensembl peptide - ENSGALP00000057811
Ensembl peptide - ENSGALP00000054892
NCBI entrez gene - 419827     See in Manteia.
RefSeq - XM_015299088
RefSeq - XM_015299089
swissprot - A0A1D5PXW3
swissprot - A0A1D5P4C6
Ensembl - ENSGALG00000034281
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tmcc2ENSDARG00000046007Danio rerio
 TMCC2ENSG00000133069Homo sapiens
 Tmcc2ENSMUSG00000042066Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMCC1 / transmembrane and coiled-coil domain family 1 / O94876* / Q69ZZ6* / transmembrane and coiled coil domains 1*ENSGALG0000000848765
TMCC3* / Q8R310* / Q9ULS5* / transmembrane and coiled-coil domain family 3* / Transmembrane and coiled-coil domain protein 3 *ENSGALG0000001132053


Protein motifs (from Interpro)
Interpro ID Name
 IPR019394  Testis-specific protein TEX28/transmembrane and coiled-coil domains protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042982 amyloid precursor protein metabolic process IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr