ENSGALG00000008487


Gallus gallus

Features
Gene ID: ENSGALG00000008487
  
Biological name :TMCC1
  
Synonyms : TMCC1 / transmembrane and coiled-coil domain family 1
  
Possible biological names infered from orthology : O94876 / Q69ZZ6 / transmembrane and coiled coil domains 1
  
Species: Gallus gallus
  
Chr. number: 12
Strand: -1
Band:
Gene start: 19650806
Gene end: 19719800
  
Corresponding Affymetrix probe sets: Gga.9520.1.S1_at (Chicken Array)   GgaAffx.21439.1.S1_s_at (Chicken Array)   GgaAffx.5347.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000013816
NCBI entrez gene - 416125     See in Manteia.
RefSeq - XM_004944723
RefSeq - XM_004944724
RefSeq - XM_015293163
swissprot - E1BST3
Ensembl - ENSGALG00000008487
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TMCC1 (1 of many)ENSDARG00000076747Danio rerio
 tmcc1bENSDARG00000060954Danio rerio
 TMCC1ENSG00000172765Homo sapiens
 Tmcc1ENSMUSG00000030126Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TMCC2 / transmembrane and coiled-coil domain family 2 / O75069* / Q80W04* / transmembrane and coiled-coil domains 2*ENSGALG0000003428149
TMCC3* / Q8R310* / Q9ULS5* / transmembrane and coiled-coil domain family 3* / Transmembrane and coiled-coil domain protein 3 *ENSGALG0000001132036


Protein motifs (from Interpro)
Interpro ID Name
 IPR019394  Testis-specific protein TEX28/transmembrane and coiled-coil domains protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007029 endoplasmic reticulum organization IEA
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:0051291 protein heterooligomerization IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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