ENSGALG00000036867


Gallus gallus

Features
Gene ID: ENSGALG00000036867
  
Biological name :CBX6
  
Synonyms : CBX6 / chromobox 6
  
Possible biological names infered from orthology : Chromobox protein homolog 6 / O95503 / Q9DBY5
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 50804456
Gene end: 50812317
  
Corresponding Affymetrix probe sets: GgaAffx.7725.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000051271
NCBI entrez gene - 107053684     See in Manteia.
RefSeq - XM_015288679
RefSeq - XM_015288685
swissprot - A0A1D5PER3
Ensembl - ENSGALG00000036867
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cbx6aENSDARG00000071051Danio rerio
 cbx6bENSDARG00000097543Danio rerio
 CBX6ENSG00000183741Homo sapiens
 Cbx6ENSMUSG00000089715Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CBX8 / chromobox 8 / Q9HC52* / Q9QXV1* / Chromobox protein homolog 8 *ENSGALG0000002654819
CBX4 / E3 SUMO-protein ligase CBX4 / O00257* / O55187* / chromobox 4*ENSGALG0000003591118
CBX2 / chromobox 2 / P30658* / Q14781* / Chromobox protein homolog 2 *ENSGALG0000002333817
CBX7 / chromobox 7 / O95931* / Q8VDS3* / Chromobox protein homolog 7 *ENSGALG0000004123612


Protein motifs (from Interpro)
Interpro ID Name
 IPR000953  Chromo/chromo shadow domain
 IPR016197  Chromo-like domain superfamily
 IPR023779  Chromo domain, conserved site
 IPR023780  Chromo domain
 IPR033773  CBX family C-terminal motif


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0000792 heterochromatin IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0031519 PcG protein complex IEA
 molecular_functionGO:0003727 single-stranded RNA binding IEA


Pathways (from Reactome)
Pathway description
Oxidative Stress Induced Senescence
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known
Regulation of PTEN gene transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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