ENSGALG00000038146


Gallus gallus

Features
Gene ID: ENSGALG00000038146
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : A6NK02 / Q3UWZ0 / Q495X7 / Q8VI40 / Q9HCM9 / TRIM39 / TRIM39-RPP21 / TRIM39-RPP21 readthrough / TRIM60 / Trim61 / Trim75 / TRIM75P / tripartite motif containing 39 / tripartite motif containing 60 / tripartite motif-containing 61 / tripartite motif-containing 75 / tripartite motif containing 75, pseudogene
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 371053
Gene end: 377550
  
Corresponding Affymetrix probe sets: Gga.9878.1.S1_at (Chicken Array)   GgaAffx.20601.1.S1_s_at (Chicken Array)   GgaAffx.566.2.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052954
Ensembl peptide - ENSGALP00000053170
NCBI entrez gene - 770718     See in Manteia.
RefSeq - XM_001232969
swissprot - A0A1D5PJG1
Ensembl - ENSGALG00000038146
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 A6NK02ENSG00000250374Homo sapiens
 Q495X7ENSG00000176979Homo sapiens
 Q9HCM9ENSG00000204599Homo sapiens
 TRIM39-RPP21ENSG00000248167Homo sapiens
 Q3UWZ0ENSMUSG00000071089Mus musculus
 Q8VI40ENSMUSG00000053490Mus musculus
 Trim39ENSMUSG00000045409Mus musculus
 Trim61ENSMUSG00000109718Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003877  SPRY domain
 IPR003879  Butyrophylin-like, SPRY domain
 IPR006574  SPRY-associated
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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