ENSGALG00000038188


Gallus gallus

Features
Gene ID: ENSGALG00000038188
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : MSH5 / MSH5-SAPCD1 / MSH5-SAPCD1 readthrough (NMD candidate) / mutS homolog 5 / O43196
  
Species: Gallus gallus
  
Chr. number: 3
Strand: 1
Band:
Gene start: 57630710
Gene end: 57633139
  
Corresponding Affymetrix probe sets: GgaAffx.1783.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000047088
NCBI entrez gene - 107052987     See in Manteia.
RefSeq - XM_015284163
swissprot - A0A1D5P335
Ensembl - ENSGALG00000038188
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 msh5ENSDARG00000077479Danio rerio
 MSH5ENSG00000204410Homo sapiens
 MSH5-SAPCD1ENSG00000255152Homo sapiens
 Msh5ENSMUSG00000007035Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000432  DNA mismatch repair protein MutS, C-terminal
 IPR007696  DNA mismatch repair protein MutS, core
 IPR007861  DNA mismatch repair protein MutS, clamp
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006298 mismatch repair IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0030983 mismatched DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr