ENSGALG00000038315


Gallus gallus

Features
Gene ID: ENSGALG00000038315
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 1
Strand: -1
Band:
Gene start: 15923203
Gene end: 15923583
  
Corresponding Affymetrix probe sets: GgaAffx.23665.1.S1_at (Chicken Array)   GgaAffx.23665.1.S1_x_at (Chicken Array)   GgaAffx.26706.1.S1_at (Chicken Array)   GgaAffx.26706.1.S1_x_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000050379
NCBI entrez gene - 429558     See in Manteia.
RefSeq - XM_004934773
RefSeq - XM_004934774
RefSeq - XM_015275809
swissprot - A0A1D5PC92
Ensembl - ENSGALG00000038315
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P0C1H3 / Histone H2B 1/2/3/4/6 / Q96A08* / P70696* / HIST1H2BA* / Histone H2B type 1-A * / histone cluster 1 H2B family member a*ENSGALG0000002757198
P0C1H3 / HIST1H2B5 / Gallus gallus histone cluster 1, H2B-V (HIST1H2B5), mRNA. / Q96A08* / P70696* / HIST1H2BA* / Histone H2B type 1-A * / histone cluster 1 H2B family member a*ENSGALG0000002759498
P0C1H3 / Histone H2B 1/2/3/4/6 / Q96A08* / P70696* / HIST1H2BA* / Histone H2B type 1-A * / histone cluster 1 H2B family member a*ENSGALG0000003793498
P0C1H3 / HIST1H2B7 / Histone H2B 1/2/3/4/6 / P70696* / Q96A08* / HIST1H2BA* / Histone H2B type 1-A * / histone cluster 1 H2B family member a*ENSGALG0000003972298
P0C1H3 / Histone H2B 1/2/3/4/6 / Q96A08* / P70696* / HIST1H2BA* / Histone H2B type 1-A * / histone cluster 1 H2B family member a*ENSGALG0000004226398
Q9PSW9 / HIST1H2B8 / Histone H2B 8 ENSGALG0000003056797
P0C1H5 / Histone H2B 7 / Q96A08* / P70696* / HIST1H2BA* / Histone H2B type 1-A * / histone cluster 1 H2B family member a*ENSGALG0000003690895
AC021097.2*ENSGALG0000003180476


Protein motifs (from Interpro)
Interpro ID Name
 IPR000558  Histone H2B
 IPR007125  Histone H2A/H2B/H3
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0000786 nucleosome IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005694 chromosome IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr