ENSGALG00000038767


Gallus gallus

Features
Gene ID: ENSGALG00000038767
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : O75333 / Q810F8 / T-box 10 / T-box transcription factor TBX10 / TBX10
  
Species: Gallus gallus
  
Chr. number: 5
Strand: 1
Band:
Gene start: 263816
Gene end: 265197
  
Corresponding Affymetrix probe sets: GgaAffx.2240.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043501
Ensembl peptide - ENSGALP00000052413
NCBI entrez gene - 428814     See in Manteia.
RefSeq - XM_015286096
swissprot - A0A1D5NT48
swissprot - A0A1D5PHY2
Ensembl - ENSGALG00000038767
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBX10ENSG00000167800Homo sapiens
 Tbx10ENSMUSG00000037477Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBX1 / T-box 1 / O43435*ENSGALG0000004118259
TBX2 / T-box 2 / Q13207* / Q60707* / T-box transcription factor TBX2 *ENSGALG0000003429740
TBX20 / Q8UW76 / T-box transcription factor TBX20 / Q9UMR3* / Q9ES03* / T-box 20*ENSGALG0000003209739
TBX3 / T-box 3 / O15119* / P70324*ENSGALG0000003604339
TBX4 / T-box 4 / P57082* / P70325*ENSGALG0000000528538
TBX18 / T-box transcription factor TBX18 / O95935* / T-box 18*ENSGALG0000003278938
TBX22 / T-box 22 / Q8K402* / Q9Y458*ENSGALG0000000409336
TBX6 / T-box-containing protein TBX6L / O95947* / P70327* / T-box 6* / T-box transcription factor TBX6 *ENSGALG0000000637436
TBX5 / Q9PWE8 / T-box transcription factor TBX5 / Q99593* / P70326* / T-box 5*ENSGALG0000000825336
TBX15 / T-box 15 / O70306* / Q96SF7* / T-box transcription factor TBX15 *ENSGALG0000001477632


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr