ENSGALG00000039935


Gallus gallus

Features
Gene ID: ENSGALG00000039935
  
Biological name :PDE1C
  
Synonyms : PDE1C / phosphodiesterase 1C
  
Possible biological names infered from orthology : Q14123 / Q64338
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 48353052
Gene end: 48628045
  
Corresponding Affymetrix probe sets: GgaAffx.7745.2.S1_at (Chicken Array)   GgaAffx.7745.3.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045332
Ensembl peptide - ENSGALP00000055982
NCBI entrez gene - 420752     See in Manteia.
RefSeq - XM_015281666
RefSeq - XM_015281665
swissprot - A0A1D5PSU3
swissprot - A0A1D5NY76
Ensembl - ENSGALG00000039935
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01067973.1ENSDARG00000090398Danio rerio
 PDE1CENSG00000154678Homo sapiens
 Pde1cENSMUSG00000004347Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PDE1A / phosphodiesterase 1A / P54750* / phosphodiesterase 1A, calmodulin-dependent*ENSGALG0000000888550
PDE4D / phosphodiesterase 4D / Q01063* / Q08499* / cAMP-specific 3,5-cyclic phosphodiesterase 4D *ENSGALG0000001472724
PDE4C* / Q08493* / Q3UEI1* / AC008397.2* / phosphodiesterase 4C* / cAMP-specific 3,5-cyclic phosphodiesterase 4C *ENSGALG0000003702924
PDE4B / cAMP-specific 3,5-cyclic phosphodiesterase 4B / Q07343* / phosphodiesterase 4B* / phosphodiesterase 4B, cAMP specific*ENSGALG0000001109422
PDE8B* / O95263* / E9Q4S1* / AC022414.1* / phosphodiesterase 8B* / High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8B * / high affinity cAMP-specific and IBMX-...ENSGALG0000000433918
PDE8A / phosphodiesterase 8A / O60658* / O88502* / High affinity cAMP-specific and IBMX-insensitive 3,5-cyclic phosphodiesterase 8A *ENSGALG0000000599218
PDE7B / phosphodiesterase 7B / Q9NP56* / Q9QXQ1* / cAMP-specific 3,5-cyclic phosphodiesterase 7B *ENSGALG0000001394117
PDE7A / phosphodiesterase 7A / P70453* / Q13946* / High affinity cAMP-specific 3,5-cyclic phosphodiesterase 7A *ENSGALG0000003839517


Protein motifs (from Interpro)
Interpro ID Name
 IPR002073  3"5"-cyclic nucleotide phosphodiesterase, catalytic domain
 IPR003607  HD/PDEase domain
 IPR013706  3"5"-cyclic nucleotide phosphodiesterase N-terminal
 IPR023088  3"5"-cyclic nucleotide phosphodiesterase
 IPR023174  3"5"-cyclic nucleotide phosphodiesterase, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007608 sensory perception of smell IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004114 3",5"-cyclic-nucleotide phosphodiesterase activity IEA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Cam-PDE 1 activation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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