ENSGALG00000040060


Gallus gallus

Features
Gene ID: ENSGALG00000040060
  
Biological name :NRF1
  
Synonyms : NRF1 / nuclear respiratory factor 1
  
Possible biological names infered from orthology : Q16656 / Q9WU00
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 805409
Gene end: 839551
  
Corresponding Affymetrix probe sets: Gga.17442.1.S1_at (Chicken Array)   GgaAffx.22430.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052661
NCBI entrez gene - 416677     See in Manteia.
RefSeq - XM_015282829
RefSeq - NM_001030646
RefSeq - XM_015282728
RefSeq - XM_015282769
RefSeq - XM_015282417
RefSeq - XM_015282467
RefSeq - XM_015282528
RefSeq - XM_015282586
RefSeq - XM_015282649
RefSeq - XM_015282685
RefSeq Peptide - NP_001025817
swissprot - Q90979
Ensembl - ENSGALG00000040060
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nrf1ENSDARG00000000018Danio rerio
 NRF1ENSG00000106459Homo sapiens
 Nrf1ENSMUSG00000058440Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR019525  Nuclear respiratory factor 1, NLS/DNA-binding, dimerisation domain
 IPR019526  Nuclear respiratory factor-1, activation binding domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001046 core promoter sequence-specific DNA binding IDA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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