ENSGALG00000040725


Gallus gallus

Features
Gene ID: ENSGALG00000040725
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology :
  
Species: Gallus gallus
  
Chr. number: 11
Strand: -1
Band:
Gene start: 10875987
Gene end: 11001271
  
Corresponding Affymetrix probe sets: GgaAffx.3051.1.S1_at (Chicken Array)   GgaAffx.3052.1.S1_at (Chicken Array)   GgaAffx.3053.1.S1_at (Chicken Array)   GgaAffx.3054.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043651
Ensembl peptide - ENSGALP00000055959
NCBI entrez gene - 415780     See in Manteia.
RefSeq - XM_414141
swissprot - A0A1D5NTJ4
swissprot - A0A1D5PSS2
Ensembl - ENSGALG00000040725
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkey-219c3.2ENSDARG00000075805Danio rerio


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAF4 / TATA-box binding protein associated factor 4 / O00268*ENSGALG0000000512145
TAF4B / TATA-box binding protein associated factor 4b / G5E8Z2* / Q92750* / Transcription initiation factor TFIID subunit 4B *ENSGALG0000001512240


Protein motifs (from Interpro)
Interpro ID Name
 IPR003894  TAFH/NHR1
 IPR007900  Transcription initiation factor TFIID component TAF4
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006352 DNA-templated transcription, initiation IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005669 transcription factor TFIID complex IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr