ENSGALG00000041193


Gallus gallus

Features
Gene ID: ENSGALG00000041193
  
Biological name :NFYB
  
Synonyms : NFYB / Nuclear transcription factor Y subunit beta / P25207
  
Possible biological names infered from orthology : P25208 / P63139
  
Species: Gallus gallus
  
Chr. number: 1
Strand: 1
Band:
Gene start: 54682343
Gene end: 54696856
  
Corresponding Affymetrix probe sets: GgaAffx.11992.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056060
Ensembl peptide - ENSGALP00000057619
Ensembl peptide - ENSGALP00000056991
Ensembl peptide - ENSGALP00000050636
Ensembl peptide - ENSGALP00000051245
NCBI entrez gene - 396205     See in Manteia.
RefSeq - NM_205269
RefSeq Peptide - NP_990600
swissprot - A0A1D5PXC5
swissprot - A0A1D5PCZ5
swissprot - P25207
Ensembl - ENSGALG00000041193
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nfybaENSDARG00000039185Danio rerio
 nfybbENSDARG00000045611Danio rerio
 NFYBENSG00000120837Homo sapiens
 NfybENSMUSG00000020248Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
POLE3 / DNA polymerase epsilon 3, accessory subunit / Q9NRF9* / polymerase (DNA directed), epsilon 3 (p17 subunit)*ENSGALG0000000887319


Protein motifs (from Interpro)
Interpro ID Name
 IPR003956  Transcription factor, NFYB/HAP3, conserved site
 IPR003958  Transcription factor CBF/NF-Y/archaeal histone domain
 IPR009072  Histone-fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016602 CCAAT-binding factor complex IEA
 cellular_componentGO:0032993 protein-DNA complex IEA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex IEA
 molecular_functionGO:0000980 RNA polymerase II distal enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0044212 transcription regulatory region DNA binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0070491 repressing transcription factor binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003247 NFYA / nuclear transcription factor Y subunit alpha / P23511* / P23708* / Mus musculus nuclear transcription factor-Y alpha (Nfya), transcript variant 3, mRNA.*  / complex






 

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