ENSGALG00000042360


Gallus gallus

Features
Gene ID: ENSGALG00000042360
  
Biological name :TRIM29
  
Synonyms : TRIM29 / tripartite motif containing 29
  
Possible biological names infered from orthology : Q14134 / Q8R2Q0 / Tripartite motif-containing protein 29
  
Species: Gallus gallus
  
Chr. number: 24
Strand: 1
Band:
Gene start: 3868816
Gene end: 3890585
  
Corresponding Affymetrix probe sets: GgaAffx.4183.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000048232
Ensembl peptide - ENSGALP00000049474
NCBI entrez gene - 419754     See in Manteia.
RefSeq - XM_417892
RefSeq - XM_015298191
RefSeq - XM_015298192
RefSeq - XM_015298187
RefSeq - XM_015298188
RefSeq - XM_015298189
RefSeq - XM_015298190
swissprot - A0A1D5P9R6
swissprot - A0A1D5P6A7
Ensembl - ENSGALG00000042360
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q14134ENSG00000137699Homo sapiens
 Q8R2Q0ENSMUSG00000032013Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TRIM25 / Gallus gallus tripartite motif containing 25 (TRIM25), mRNA. / Q14258* / Q61510* / tripartite motif containing 25* / E3 ubiquitin/ISG15 ligase TRIM25 *ENSGALG0000000314417
TRIM47 / tripartite motif containing 47 / Q8C0E3* / Q96LD4*ENSGALG000000283017


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:1900181 negative regulation of protein localization to nucleus IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 molecular_functionGO:0002039 p53 binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0098641 cadherin binding involved in cell-cell adhesion IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr