ENSMUSG00000032013


Mus musculus

Features
Gene ID: ENSMUSG00000032013
  
Biological name :Trim29
  
Synonyms : Q8R2Q0 / Trim29 / Tripartite motif-containing protein 29
  
Possible biological names infered from orthology : Q14134 / tripartite motif containing 29
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: A5.1
Gene start: 43310848
Gene end: 43336115
  
Corresponding Affymetrix probe sets: 10584604 (MoGene1.0st)   1424162_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034511
NCBI entrez gene - 72169     See in Manteia.
MGI - MGI:1919419
RefSeq - XM_006510617
RefSeq - NM_023655
RefSeq - XM_006510616
RefSeq Peptide - NP_076144
swissprot - Q8R2Q0
Ensembl - ENSMUSG00000032013
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRIM29ENSGALG00000042360Gallus gallus
 Q14134ENSG00000137699Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q99PP9 / Trim16 / Tripartite motif-containing protein 16 / Q309B1* / O95361* / TRIM16L* / AC005324.3* / tripartite motif containing 16* / tripartite motif containing 16 like*ENSMUSG0000004782119
Q61510 / Trim25 / E3 ubiquitin/ISG15 ligase TRIM25 / Q14258* / tripartite motif containing 25*ENSMUSG0000000027518
Q8C0E3 / Trim47 / tripartite motif-containing 47 / Q96LD4*ENSMUSG0000002077318
Trim80 / tripartite motif-containing 80ENSMUSG0000007033217
Q8BFW4 / Trim65 / Tripartite motif-containing protein 65 / Q6PJ69* / tripartite motif containing 65*ENSMUSG0000005451715


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IGI
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0098609 cell-cell adhesion IEA
 biological_processGO:1900181 negative regulation of protein localization to nucleus IDA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005913 cell-cell adherens junction IEA
 molecular_functionGO:0002039 p53 binding IDA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0098641 cadherin binding involved in cell-cell adhesion IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000186 decreased circulating HDL cholesterol level "lower than average level of high density lipoprotein in blood; this molecule transports cholesterol to the liver for excretion in bile" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Tmod2tm1b(KOMP)Wtsi/Tmod2tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Tmod2tm1b(KOMP)Wtsi/J

 MP:0003960 increased lean body mass "more than average fat-free physical bulk or volume of the body including all its components except adipose tissue" [honda:Hiraoki Onda, Mouse GEnome Informatics Curator]
Show

Allelic Composition: Tmod2tm1b(KOMP)Wtsi/Tmod2tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Tmod2tm1b(KOMP)Wtsi/J

 MP:0005292 improved glucose tolerance "better than the normal response to oral consumption or intravenous injection of specified amounts of glucose and indicative of insulin sensitivity; measured by determining whole blood or plasma sugar level in a fasting state before and after taking glucose at specified intervals" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Tmod2tm1b(KOMP)Wtsi/Tmod2tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Tmod2tm1b(KOMP)Wtsi/J

 MP:0010025 decreased total body fat amount "less than the normal total amount of connective tissue composed of fat cells within the entire body" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Tmod2tm1b(KOMP)Wtsi/Tmod2tm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Tmod2tm1b(KOMP)Wtsi/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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