ENSMUSG00000016520


Mus musculus

Features
Gene ID: ENSMUSG00000016520
  
Biological name :Lnx2
  
Synonyms : Ligand of Numb protein X 2 / Lnx2 / Q91XL2
  
Possible biological names infered from orthology : Q8N448
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: G3
Gene start: 147016655
Gene end: 147076586
  
Corresponding Affymetrix probe sets: 10535759 (MoGene1.0st)   1460249_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000016664
NCBI entrez gene - 140887     See in Manteia.
MGI - MGI:2155959
RefSeq - NM_080795
RefSeq - XM_006504800
RefSeq Peptide - NP_542985
swissprot - Q91XL2
Ensembl - ENSMUSG00000016520
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lnx2aENSDARG00000029177Danio rerio
 ENSGALG00000038864Gallus gallus
 ENSGALG00000017096Gallus gallus
 LNX2ENSG00000139517Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lnx1 / O70263 / ligand of numb-protein X 1 / Q8TBB1*ENSMUSG0000002922851
Pdzd2 / PDZ domain containing 2 / O15018*ENSMUSG0000002219721
Mpdz / Q8VBX6 / multiple PDZ domain protein / O75970* / multiple PDZ domain crumbs cell polarity complex component*ENSMUSG0000002840220
Patj / Q63ZW7 / Mus musculus PATJ, crumbs cell polarity complex component (Patj), transcript variant 5, mRNA. / Q8NI35* / PATJ, crumbs cell polarity complex component*ENSMUSG0000006185919
Il16 / O54824 / Pro-interleukin-16 Interleukin-16 / Q14005* / interleukin 16*ENSMUSG0000000174116
Pard3 / Q99NH2 / par-3 family cell polarity regulator / Q8TEW0*ENSMUSG0000002581215
Pard3b / Q9CSB4 / par-3 family cell polarity regulator beta / Q8TEW8*ENSMUSG0000005206213


Protein motifs (from Interpro)
Interpro ID Name
 IPR001478  PDZ domain
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR036034  PDZ superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051260 protein homooligomerization IDA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030165 PDZ domain binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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