ENSMUSG00000023007


Mus musculus

Features
Gene ID: ENSMUSG00000023007
  
Biological name :Prpf40b
  
Synonyms : pre-mRNA processing factor 40B / Prpf40b
  
Possible biological names infered from orthology : pre-mRNA processing factor 40 homolog B / Q6NWY9
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: F1
Gene start: 99295087
Gene end: 99317018
  
Corresponding Affymetrix probe sets: 10426722 (MoGene1.0st)   1419512_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000119295
Ensembl peptide - ENSMUSP00000115869
Ensembl peptide - ENSMUSP00000119556
Ensembl peptide - ENSMUSP00000123527
Ensembl peptide - ENSMUSP00000122649
Ensembl peptide - ENSMUSP00000121260
Ensembl peptide - ENSMUSP00000120030
Ensembl peptide - ENSMUSP00000023745
Ensembl peptide - ENSMUSP00000113282
NCBI entrez gene - 54614     See in Manteia.
MGI - MGI:1925583
RefSeq - XM_017316707
RefSeq - XM_006521182
RefSeq - XM_006521183
RefSeq - XM_006521184
RefSeq - XM_006521185
RefSeq - XM_006521186
RefSeq - XM_006521188
RefSeq - XM_006521189
RefSeq - XM_006521190
RefSeq - XM_006521191
RefSeq - XM_011245697
RefSeq - XM_011245698
RefSeq - NM_001348256
RefSeq - NM_018786
RefSeq - XM_006521178
RefSeq - XM_006521179
RefSeq - XM_006521180
RefSeq - XM_006521181
RefSeq Peptide - NP_061256
RefSeq Peptide - NP_001335185
swissprot - D6RD12
swissprot - D3Z4N6
swissprot - F6QF44
swissprot - E9QP07
swissprot - F6XW22
swissprot - D3Z1Y9
swissprot - A0A0R4J1S2
swissprot - F6W479
swissprot - E9QMI6
Ensembl - ENSMUSG00000023007
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q6NWY9ENSG00000110844Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9R1C7 / Prpf40a / Pre-mRNA-processing factor 40 homolog A / O75400*ENSMUSG0000006113658
Q8CGF7 / Tcerg1 / transcription elongation regulator 1 (CA150) / O14776* / transcription elongation regulator 1*ENSMUSG0000002449820
Q3B807 / Tcerg1l / Transcription elongation regulator 1-like protein / Q5VWI1* / transcription elongation regulator 1 like*ENSMUSG000000910029


Protein motifs (from Interpro)
Interpro ID Name
 IPR001202  WW domain
 IPR002713  FF domain
 IPR036020  WW domain superfamily
 IPR036517  FF domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr