ENSMUSG00000028262


Mus musculus

Features
Gene ID: ENSMUSG00000028262
  
Biological name :Clca3a2
  
Synonyms : chloride channel accessory 3A2 / Clca3a2
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: H2
Gene start: 144796559
Gene end: 144819494
  
Corresponding Affymetrix probe sets: 10502565 (MoGene1.0st)   1419463_at (Mouse Genome 430 2.0 Array)   1437578_at (Mouse Genome 430 2.0 Array)   1460259_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000143543
Ensembl peptide - ENSMUSP00000029929
Ensembl peptide - ENSMUSP00000143332
NCBI entrez gene - 80797     See in Manteia.
MGI - MGI:1931471
RefSeq - XM_017319812
RefSeq - NM_030601
RefSeq - XM_006502346
RefSeq - XM_011240289
RefSeq - XM_017319811
RefSeq Peptide - NP_085104
swissprot - A0A0G2JGF3
swissprot - A0A0G2JFW5
swissprot - Q9EQR4
Ensembl - ENSMUSG00000028262
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 clca1ENSDARG00000100941Danio rerio
 clca1ENSDARG00000016290Danio rerio
 clca5.1ENSDARG00000099606Danio rerio
 si:ch211-116o3.3ENSDARG00000086498Danio rerio
 ENSGALG00000006322Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9QX15 / Clca3a1 / Calcium-activated chloride channel regulator 3A-1 ENSMUSG0000005602595
Clca3b / chloride channel accessory 3BENSMUSG0000003703381
Clca1 / Q9D7Z6 / Calcium-activated chloride channel regulator 1 / A8K7I4* / chloride channel accessory 1*ENSMUSG0000002825549
Clca4b / chloride channel accessory 4B / CLCA4* / Q14CN2* / chloride channel accessory 4*ENSMUSG0000007419549
Clca4a / CLCA4* / Q14CN2* / chloride channel accessory 4*ENSMUSG0000006854748
Clca2 / Q8BG22 / Calcium-activated chloride channel regulator 2 / Q9UQC9* / chloride channel accessory 2*ENSMUSG0000003696045


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR004727  Calcium-activated chloride channel protein, chordata
 IPR013642  Calcium-activated chloride channel, N-terminal
 IPR013783  Immunoglobulin-like fold
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR036465  von Willebrand factor A-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006821 chloride transport IEA
 biological_processGO:0043276 anoikis IDA
 biological_processGO:0097192 extrinsic apoptotic signaling pathway in absence of ligand IDA
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 molecular_functionGO:0005229 intracellular calcium activated chloride channel activity IBA
 molecular_functionGO:0008237 metallopeptidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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