ENSDARG00000100941


Danio rerio

Features
Gene ID: ENSDARG00000100941
  
Biological name :clca5.2
  
Synonyms : chloride channel accessory 5, tandem duplicate 2 / clca1 / clca5.2
  
Possible biological names infered from orthology : A8K7I4 / Calcium-activated chloride channel regulator 1 / Calcium-activated chloride channel regulator 2 / Calcium-activated chloride channel regulator 3A-1 / chloride channel accessory 1 / chloride channel accessory 2 / chloride channel accessory 3A2 / chloride channel accessory 3B / chloride channel accessory 4 / chloride channel accessory 4B / CLCA2 / Clca3a1 / Clca3a2 / Clca3b / CLCA4 / Clca4a / Clca4b / Q14CN2 / Q8BG22 / Q9D7Z6 / Q9QX15 / Q9UQC9
  
Species: Danio rerio
  
Chr. number: 15
Strand: 1
Band:
Gene start: 14145346
Gene end: 14173592
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000047530
Ensembl peptide - ENSDARP00000138267
Ensembl peptide - ENSDARP00000137157
NCBI entrez gene - 101886445     See in Manteia.
RefSeq - XM_009291544
swissprot - A0A0R4ITR5
swissprot - A0A0R4IRF2
swissprot - F1QRC6
ZFIN ID - ZDB-GENE-030131-6221
ZFIN ID - ZDB-GENE-131126-1
Ensembl - ENSDARG00000100941
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000006322Gallus gallus
 CLCA1ENSG00000016490Homo sapiens
 CLCA2ENSG00000137975Homo sapiens
 CLCA4ENSG00000016602Homo sapiens
 Clca1ENSMUSG00000028255Mus musculus
 Clca2ENSMUSG00000036960Mus musculus
 Clca3a2ENSMUSG00000028262Mus musculus
 Clca3bENSMUSG00000037033Mus musculus
 Clca4aENSMUSG00000068547Mus musculus
 Clca4bENSMUSG00000074195Mus musculus
 Q9QX15ENSMUSG00000056025Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
clca1 / chloride channel accessory 1 / CLCA4* / CLCA2* / A8K7I4* / Clca3b* / Clca4a* / Clca4b* / Q14CN2* / Q8BG22* / Q9D7Z6* / Q9QX15* / Q9UQC9* / Clca3a1* / Clca3a2* / chloride channel acc...ENSDARG0000001629062
clca5.1 / chloride channel accessory 5, tandem duplicate 1 / CLCA4* / CLCA2* / CLCA1* / A8K7I4* / Clca3b* / Clca4a* / Clca4b* / Q14CN2* / Q8BG22* / Q9D7Z6* / Q9QX15* / Q9UQC9* / Clca3a1* / ...ENSDARG0000009960645
si:ch211-116o3.3 / CLCA1* / CLCA4* / CLCA2* / A8K7I4* / Clca3b* / Clca4a* / Clca4b* / Q14CN2* / Q8BG22* / Q9D7Z6* / Q9QX15* / Q9UQC9* / Clca3a1* / Clca3a2* / chloride channel accessory 4* /...ENSDARG0000008649820


Protein motifs (from Interpro)
Interpro ID Name
 IPR002035  von Willebrand factor, type A
 IPR013642  Calcium-activated chloride channel, N-terminal
 IPR013783  Immunoglobulin-like fold
 IPR024079  Metallopeptidase, catalytic domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:1902476 chloride transmembrane transport IBA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005229 intracellular calcium activated chloride channel activity IBA


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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