ENSMUSG00000030161


Mus musculus

Features
Gene ID: ENSMUSG00000030161
  
Biological name :Gabarapl1
  
Synonyms : Gabarapl1 / Gamma-aminobutyric acid receptor-associated protein-like 1 / Q8R3R8
  
Possible biological names infered from orthology : GABA type A receptor associated protein like 1 / Q9H0R8
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: F3
Gene start: 129533160
Gene end: 129542346
  
Corresponding Affymetrix probe sets: 10542200 (MoGene1.0st)   1416418_at (Mouse Genome 430 2.0 Array)   1416419_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000144803
Ensembl peptide - ENSMUSP00000145175
Ensembl peptide - ENSMUSP00000145078
Ensembl peptide - ENSMUSP00000032264
NCBI entrez gene - 57436     See in Manteia.
MGI - MGI:1914980
RefSeq - NM_020590
RefSeq Peptide - NP_065615
swissprot - A0A0N4SVF3
swissprot - A0A0N4SUS3
swissprot - Q8R3R8
Ensembl - ENSMUSG00000030161
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zgc:92606ENSDARG00000040971Danio rerio
 GABARAPL1ENSGALG00000014723Gallus gallus
 Q9H0R8ENSG00000139112Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9DCD6 / Gabarap / Gamma-aminobutyric acid receptor-associated protein / O95166* / GABA type A receptor-associated protein*ENSMUSG0000001856786
P60521 / Gabarapl2 / Gamma-aminobutyric acid receptor-associated protein-like 2 / P60520* / GABA type A receptor associated protein like 2*ENSMUSG0000003195061
Q91VR7 / Map1lc3a / Microtubule-associated proteins 1A/1B light chain 3A / Q9H492* / microtubule associated protein 1 light chain 3 alpha*ENSMUSG0000002760234
Q9CQV6 / Map1lc3b / Microtubule-associated proteins 1A/1B light chain 3B / A6NCE7* / Q9GZQ8* / MAP1LC3B2* / microtubule associated protein 1 light chain 3 beta* / microtubule associated pr...ENSMUSG0000003181232


Protein motifs (from Interpro)
Interpro ID Name
 IPR004241  Autophagy protein Atg8 ubiquitin-like
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0000422 autophagy of mitochondrion IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0006995 cellular response to nitrogen starvation IBA
 cellular_componentGO:0000421 autophagosome membrane IBA
 cellular_componentGO:0005622 intracellular ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISO
 cellular_componentGO:0005776 autophagosome ISO
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IBA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005874 microtubule IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0032590 dendrite membrane IEA
 cellular_componentGO:0032839 dendrite cytoplasm IEA
 cellular_componentGO:0044297 cell body IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008092 cytoskeletal protein binding ISA
 molecular_functionGO:0030957 Tat protein binding ISO
 molecular_functionGO:0031625 ubiquitin protein ligase binding ISO


Pathways (from Reactome)
Pathway description
Macroautophagy


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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