ENSMUSG00000030753


Mus musculus

Features
Gene ID: ENSMUSG00000030753
  
Biological name :Thap12
  
Synonyms : Q9CUX1 / Thap12 / THAP domain containing 12
  
Possible biological names infered from orthology : O43422
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: E1
Gene start: 98703103
Gene end: 98718062
  
Corresponding Affymetrix probe sets: 10555179 (MoGene1.0st)   1426482_at (Mouse Genome 430 2.0 Array)   1426483_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000118403
Ensembl peptide - ENSMUSP00000118736
Ensembl peptide - ENSMUSP00000033009
NCBI entrez gene - 72981     See in Manteia.
MGI - MGI:1920231
RefSeq - XM_006508223
RefSeq - XM_006508224
RefSeq - XM_011241915
RefSeq - NM_028410
RefSeq Peptide - NP_082686
swissprot - Q9CUX1
swissprot - D6RH75
swissprot - D6RI43
Ensembl - ENSMUSG00000030753
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 thap12aENSDARG00000042489Danio rerio
 thap12bENSDARG00000020964Danio rerio
 THAP12ENSGALG00000000838Gallus gallus
 O43422ENSG00000137492Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006612  THAP-type zinc finger
 IPR008906  HAT, C-terminal dimerisation domain
 IPR012337  Ribonuclease H-like superfamily
 IPR025398  Domain of unknown function DUF4371


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0016310 phosphorylation IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr