ENSMUSG00000031662


Mus musculus

Features
Gene ID: ENSMUSG00000031662
  
Biological name :Snx20
  
Synonyms : Snx20 / sorting nexin 20
  
Possible biological names infered from orthology : Q7Z614
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: C3
Gene start: 88626563
Gene end: 88636128
  
Corresponding Affymetrix probe sets: 10580504 (MoGene1.0st)   1426299_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034087
NCBI entrez gene - 71607     See in Manteia.
MGI - MGI:1918857
RefSeq - XM_011248503
RefSeq - NM_027840
RefSeq - XM_006531371
RefSeq Peptide - NP_082116
swissprot - A0A0R4J0D0
Ensembl - ENSMUSG00000031662
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx20ENSDARG00000045554Danio rerio
 SNX20ENSGALG00000038374Gallus gallus
 SNX20ENSG00000167208Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Snx21 / Q3UR97 / Sorting nexin-21 / Q969T3* / sorting nexin family member 21*ENSMUSG0000005037335


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Sprtm1Lex/Sprtm1Lex
Genetic Background: involves: 129S/SvEvBrd * C57BL/6J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr