ENSMUSG00000050373


Mus musculus

Features
Gene ID: ENSMUSG00000050373
  
Biological name :Snx21
  
Synonyms : Q3UR97 / Snx21 / Sorting nexin-21
  
Possible biological names infered from orthology : Q969T3 / sorting nexin family member 21
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H3
Gene start: 164785823
Gene end: 164793816
  
Corresponding Affymetrix probe sets: 10478580 (MoGene1.0st)   1427070_at (Mouse Genome 430 2.0 Array)   1453776_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000133914
Ensembl peptide - ENSMUSP00000054137
Ensembl peptide - ENSMUSP00000133344
Ensembl peptide - ENSMUSP00000134133
Ensembl peptide - ENSMUSP00000134256
NCBI entrez gene - 101113     See in Manteia.
MGI - MGI:1917729
RefSeq - XM_006498531
RefSeq - NM_133924
RefSeq - XM_006498527
RefSeq - XM_006498528
RefSeq - XM_006498530
RefSeq Peptide - NP_598685
swissprot - Q3UR97
swissprot - G3UYL5
swissprot - G3UYX2
swissprot - G3UY23
swissprot - G3UWM2
Ensembl - ENSMUSG00000050373
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx21ENSDARG00000062770Danio rerio
 SNX21ENSGALG00000006836Gallus gallus
 SNX21ENSG00000124104Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Snx20 / sorting nexin 20 / Q7Z614*ENSMUSG0000003166230


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 biological_processGO:0015031 protein transport IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0031901 early endosome membrane IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IDA
 molecular_functionGO:0008289 lipid binding IEA
 molecular_functionGO:0032266 phosphatidylinositol-3-phosphate binding IDA
 molecular_functionGO:0035091 phosphatidylinositol binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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