ENSMUSG00000033216


Mus musculus

Features
Gene ID: ENSMUSG00000033216
  
Biological name :Eefsec
  
Synonyms : Eefsec / Q9JHW4 / Selenocysteine-specific elongation factor
  
Possible biological names infered from orthology : eukaryotic elongation factor, selenocysteine-tRNA specific / P57772
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: D1
Gene start: 88257334
Gene end: 88446539
  
Corresponding Affymetrix probe sets: 10546104 (MoGene1.0st)   1416964_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000131207
Ensembl peptide - ENSMUSP00000145480
Ensembl peptide - ENSMUSP00000145448
Ensembl peptide - ENSMUSP00000145017
Ensembl peptide - ENSMUSP00000144839
Ensembl peptide - ENSMUSP00000144824
NCBI entrez gene - 65967     See in Manteia.
MGI - MGI:2137092
RefSeq - XM_006506465
RefSeq - NM_023060
RefSeq - XM_006506464
RefSeq Peptide - NP_075547
swissprot - A0A0N4SWB3
swissprot - A0A0N4SWD9
swissprot - A0A0N4SUU3
swissprot - Q9JHW4
swissprot - A0A0N4SVA4
swissprot - A0A0N4SUV6
Ensembl - ENSMUSG00000033216
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 eefsecENSDARG00000004696Danio rerio
 EEFSECENSGALG00000038684Gallus gallus
 EEFSECENSG00000132394Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tufm / Q8BFR5 / Tu translation elongation factor, mitochondrial / P49411*ENSMUSG0000007383818


Protein motifs (from Interpro)
Interpro ID Name
 IPR000795  Transcription factor, GTP-binding domain
 IPR004161  Translation elongation factor EFTu-like, domain 2
 IPR005225  Small GTP-binding protein domain
 IPR009000  Translation protein, beta-barrel domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001514 selenocysteine incorporation IMP
 biological_processGO:0006412 translation IEA
 biological_processGO:0006414 translational elongation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0000049 tRNA binding IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003746 translation elongation factor activity IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005525 GTP binding IEA
 molecular_functionGO:0035368 selenocysteine insertion sequence binding IDA
 molecular_functionGO:0043021 ribonucleoprotein complex binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr