ENSMUSG00000038209


Mus musculus

Features
Gene ID: ENSMUSG00000038209
  
Biological name :Itln1
  
Synonyms : intelectin 1 (galactofuranose binding) / Itln1 / O88310
  
Possible biological names infered from orthology : intelectin 1 / Q8WWA0
  
Species: Mus musculus
  
Chr. number: 1
Strand: -1
Band: H3
Gene start: 171518122
Gene end: 171535294
  
Corresponding Affymetrix probe sets: 10360149 (MoGene1.0st)   1418165_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000126385
Ensembl peptide - ENSMUSP00000043837
NCBI entrez gene - 493583     See in Manteia.
NCBI entrez gene - 16429     See in Manteia.
MGI - MGI:1333831
RefSeq - NM_010584
RefSeq - XM_006496676
RefSeq - NM_001007552
RefSeq Peptide - NP_001007553
RefSeq Peptide - NP_034714
swissprot - D9J349
swissprot - O88310
swissprot - F6YSS8
Ensembl - ENSMUSG00000038209
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 itln1ENSDARG00000007534Danio rerio
 itln2ENSDARG00000093796Danio rerio
 itln2ENSDARG00000054054Danio rerio
 itln2ENSDARG00000036084Danio rerio
 itln3ENSDARG00000003523Danio rerio
 si:ch211-194p6.10ENSDARG00000105568Danio rerio
 si:ch211-194p6.12ENSDARG00000095082Danio rerio
 si:ch211-194p6.7ENSDARG00000105598Danio rerio
 si:dkey-182o15.5ENSDARG00000053630Danio rerio
 ITLN1ENSG00000179914Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002181  Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
 IPR014716  Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1
 IPR036056  Fibrinogen-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001934 positive regulation of protein phosphorylation IEA
 biological_processGO:0009624 response to nematode IDA
 biological_processGO:0046326 positive regulation of glucose import ISS
 biological_processGO:0070207 protein homotrimerization IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031225 anchored component of membrane IEA
 cellular_componentGO:0031526 brush border membrane IDA
 cellular_componentGO:0043235 receptor complex IEA
 cellular_componentGO:0045121 membrane raft IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0030246 carbohydrate binding ISS
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0070492 oligosaccharide binding IDA


Pathways (from Reactome)
Pathway description
Antimicrobial peptides


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Rab38em1Rkuhn/Rab38em1Rkuhn
Genetic Background: involves: C57BL/6JCrl * FVB/NCrl

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000038209 Itln1 / O88310 / intelectin 1 (galactofuranose binding) / Q8WWA0* / intelectin 1*  / complex






 

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