ENSMUSG00000039678


Mus musculus

Features
Gene ID: ENSMUSG00000039678
  
Biological name :Tbc1d13
  
Synonyms : Q8R3D1 / Tbc1d13 / TBC1 domain family, member 13
  
Possible biological names infered from orthology : Q9NVG8
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: B
Gene start: 30133746
Gene end: 30152013
  
Corresponding Affymetrix probe sets: 10470936 (MoGene1.0st)   1424082_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000120763
Ensembl peptide - ENSMUSP00000048426
Ensembl peptide - ENSMUSP00000120228
NCBI entrez gene - 70296     See in Manteia.
MGI - MGI:2385326
RefSeq - XM_017319254
RefSeq - NM_146252
RefSeq - XM_006498320
RefSeq - XM_006498321
RefSeq - XM_006498322
RefSeq Peptide - NP_666364
swissprot - Q8R3D1
swissprot - D6RJI8
swissprot - D6RI34
swissprot - Q3TZ63
Ensembl - ENSMUSG00000039678
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D13ENSGALG00000004645Gallus gallus
 Q9NVG8ENSG00000107021Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q80XQ2 / Tbc1d5 / TBC1 domain family member 5 / Q92609*ENSMUSG0000002392324


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR035969  Rab-GTPase-TBC domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IDA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017137 Rab GTPase binding IDA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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