ENSMUSG00000043411


Mus musculus

Features
Gene ID: ENSMUSG00000043411
  
Biological name :Usp48
  
Synonyms : Q3V0C5 / ubiquitin specific peptidase 48 / Usp48
  
Possible biological names infered from orthology : Q86UV5
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D3
Gene start: 137593755
Gene end: 137658537
  
Corresponding Affymetrix probe sets: 10509379 (MoGene1.0st)   1419277_at (Mouse Genome 430 2.0 Array)   1419278_at (Mouse Genome 430 2.0 Array)   1424056_at (Mouse Genome 430 2.0 Array)   1445157_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000115526
Ensembl peptide - ENSMUSP00000115533
Ensembl peptide - ENSMUSP00000123154
Ensembl peptide - ENSMUSP00000119691
Ensembl peptide - ENSMUSP00000118084
Ensembl peptide - ENSMUSP00000118081
Ensembl peptide - ENSMUSP00000117989
Ensembl peptide - ENSMUSP00000055016
Ensembl peptide - ENSMUSP00000101463
Ensembl peptide - ENSMUSP00000101464
Ensembl peptide - ENSMUSP00000101465
Ensembl peptide - ENSMUSP00000101466
Ensembl peptide - ENSMUSP00000114800
NCBI entrez gene - 170707     See in Manteia.
MGI - MGI:2158502
RefSeq - XM_017320013
RefSeq - NM_001347227
RefSeq - NM_001355588
RefSeq - NM_130879
RefSeq - XM_017320005
RefSeq - XM_017320006
RefSeq - XM_017320007
RefSeq - XM_017320008
RefSeq - XM_017320009
RefSeq - XM_017320010
RefSeq - XM_017320011
RefSeq - XM_017320012
RefSeq Peptide - NP_001334156
RefSeq Peptide - NP_001342517
RefSeq Peptide - NP_570949
swissprot - A2ALS9
swissprot - A2ALS8
swissprot - A2ALR9
swissprot - A2ALR8
swissprot - F6TGT8
swissprot - F6TH61
swissprot - F6VSP0
swissprot - F6VSQ9
swissprot - F6Z2T3
swissprot - F7ALR2
swissprot - A2ALR5
swissprot - Q3V0C5
swissprot - A2BDP2
Ensembl - ENSMUSG00000043411
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp48ENSDARG00000090301Danio rerio
 USP48ENSGALG00000030857Gallus gallus
 USP48ENSG00000090686Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Usp34 / Q6ZQ93 / ubiquitin specific peptidase 34 / Q70CQ2*ENSMUSG0000005634218
Usp47 / Q8BY87 / ubiquitin specific peptidase 47 / Q96K76*ENSMUSG0000005926318
Usp40 / Q8BWR4 / ubiquitin specific peptidase 40 / Q9NVE5*ENSMUSG0000000550116
Usp24 / B1AY13 / ubiquitin specific peptidase 24 / Q9UPU5*ENSMUSG0000002851416
Usp9x / ubiquitin specific peptidase 9, X chromosome / Q93008* / ubiquitin specific peptidase 9, X-linked*ENSMUSG0000003101016
Usp9y / ubiquitin specific peptidase 9, Y chromosome / O00507* / ubiquitin specific peptidase 9, Y-linked*ENSMUSG0000006904415
Usp7 / ubiquitin specific peptidase 7 / Q93009*ENSMUSG0000002271014
Usp18 / Q9WTV6 / ubiquitin specific peptidase 18 / USP41* / Q9UMW8* / Q3LFD5* / ubiquitin specific peptidase 41*ENSMUSG000000301078


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR006615  Peptidase C19, ubiquitin-specific peptidase, DUSP domain
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain
 IPR029071  Ubiquitin-like domain superfamily
 IPR033841  Ubiquitin-specific peptidase 48
 IPR035927  DUSP-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
Ub-specific processing proteases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000026942 Traf2 / P39429 / TNF receptor-associated factor 2 / Q12933*  / complex






 

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