ENSMUSG00000046191


Mus musculus

Features
Gene ID: ENSMUSG00000046191
  
Biological name :Pcdhb20
  
Synonyms : Pcdhb20 / protocadherin beta 20
  
Possible biological names infered from orthology : PCDHB14 / protocadherin beta 14 / Q9Y5E9
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 37504264
Gene end: 37507822
  
Corresponding Affymetrix probe sets: 10455128 (MoGene1.0st)   1449583_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000137038
NCBI entrez gene - 93891     See in Manteia.
MGI - MGI:2136758
RefSeq - NM_053145
RefSeq Peptide - NP_444375
swissprot - Q91XZ9
Ensembl - ENSMUSG00000046191
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000045780Gallus gallus
 ENSGALG00000038668Gallus gallus
 Q9Y5E9ENSG00000120327Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdhb15 / protocadherin beta 15 / PCDHB7* / Q9Y5E2* / protocadherin beta 7*ENSMUSG0000004703371
Pcdhb16 / Q9Y5F0* / PCDHB8* / Q9UN66* / PCDHB13* / protocadherin beta 8* / protocadherin beta 13*ENSMUSG0000004791071
Pcdhb2 / protocadherin beta 2 / Q9Y5E7*ENSMUSG0000005159971
Pcdhb19 / protocadherin beta 19 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004331370
Q91Y02 / Pcdhb18 / Protocadherin beta-18 / PCDHB9* / Q9UN67* / Q9Y5E1* / PCDHB10* / protocadherin beta 9* / protocadherin beta 10*ENSMUSG0000004834770
Pcdhb21 / protocadherin beta 21ENSMUSG0000004402269
Q6PB90 / Pcdhb14 / Protocadherin beta-14 ENSMUSG0000004404369
Pcdhb3 / protocadherin beta 3 / Q9Y5E6*ENSMUSG0000004549869
Pcdhb17 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004638769
Pcdhb22 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000007359169
Pcdhb13 / protocadherin beta 13 / PCDHB6* / Q9Y5E3* / protocadherin beta 6*ENSMUSG0000004730768
Pcdhb9 / protocadherin beta 9 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000005124268
Pcdhb5 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000006368768
Pcdhb7 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000004506267
Pcdhb4 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004568967
Pcdhb12 / protocadherin beta 12 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004345866
Pcdhb11 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000005148666
Pcdhb6 / Q91XZ4 / Protocadherin beta-6 / Q9Y5E4* / PCDHB5* / protocadherin beta 5*ENSMUSG0000005167866
Pcdhb10 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004565765
Pcdhb8 / Q91XZ2 / Protocadherin beta-8 / Q9Y5E4* / PCDHB5* / protocadherin beta 5*ENSMUSG0000004587665


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007268 chemical synaptic transmission IBA
 biological_processGO:0007416 synapse assembly IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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