ENSMUSG00000051242


Mus musculus

Features
Gene ID: ENSMUSG00000051242
  
Biological name :Pcdhb9
  
Synonyms : Pcdhb9 / protocadherin beta 9
  
Possible biological names infered from orthology : PCDHB4 / protocadherin beta 4 / Q9Y5E5
  
Species: Mus musculus
  
Chr. number: 18
Strand: 1
Band: B3
Gene start: 37400855
Gene end: 37403909
  
Corresponding Affymetrix probe sets: 10455080 (MoGene1.0st)   1422640_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000058801
NCBI entrez gene - 93880     See in Manteia.
MGI - MGI:2136744
RefSeq - NM_053134
RefSeq Peptide - NP_444364
swissprot - E9Q5G2
Ensembl - ENSMUSG00000051242
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000045780Gallus gallus
 ENSGALG00000038668Gallus gallus
 PCDHB4ENSG00000081818Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcdhb7 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000004506286
Pcdhb5 / PCDHB4* / Q9Y5E5* / protocadherin beta 4*ENSMUSG0000006368781
Q6PB90 / Pcdhb14 / Protocadherin beta-14 ENSMUSG0000004404370
Pcdhb10 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004565769
Pcdhb4 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004568969
Pcdhb11 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000005148669
Pcdhb2 / protocadherin beta 2 / Q9Y5E7*ENSMUSG0000005159967
Pcdhb6 / Q91XZ4 / Protocadherin beta-6 / Q9Y5E4* / PCDHB5* / protocadherin beta 5*ENSMUSG0000005167867
Pcdhb12 / protocadherin beta 12 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004345866
Pcdhb8 / Q91XZ2 / Protocadherin beta-8 / Q9Y5E4* / PCDHB5* / protocadherin beta 5*ENSMUSG0000004587666
Pcdhb15 / protocadherin beta 15 / PCDHB7* / Q9Y5E2* / protocadherin beta 7*ENSMUSG0000004703366
Pcdhb13 / protocadherin beta 13 / PCDHB6* / Q9Y5E3* / protocadherin beta 6*ENSMUSG0000004730766
Pcdhb22 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000007359166
Pcdhb19 / protocadherin beta 19 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004331365
Pcdhb3 / protocadherin beta 3 / Q9Y5E6*ENSMUSG0000004549865
Pcdhb20 / protocadherin beta 20 / Q9Y5E9* / PCDHB14* / protocadherin beta 14*ENSMUSG0000004619165
Pcdhb17 / PCDHB5* / Q9Y5E4* / protocadherin beta 5*ENSMUSG0000004638765
Pcdhb16 / Q9Y5F0* / PCDHB8* / Q9UN66* / PCDHB13* / protocadherin beta 8* / protocadherin beta 13*ENSMUSG0000004791065
Q91Y02 / Pcdhb18 / Protocadherin beta-18 / PCDHB9* / Q9UN67* / Q9Y5E1* / PCDHB10* / protocadherin beta 9* / protocadherin beta 10*ENSMUSG0000004834765
Pcdhb21 / protocadherin beta 21ENSMUSG0000004402264


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR013164  Cadherin, N-terminal
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR032455  Cadherin, cytoplasmic C-terminal domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IBA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007268 chemical synaptic transmission IBA
 biological_processGO:0007416 synapse assembly IBA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr