ENSMUSG00000046196


Mus musculus
proteinTtc39dtetratricopeptide-likehelicaldomainsuperfamilyinclusionbodyclearanceimltetratricopeptiderepeatbiologicalprocesscellularcomponentmolecularfunctionbinding

Features
Gene ID: ENSMUSG00000046196
  
Biological name :Ttc39d
  
Synonyms : tetratricopeptide repeat domain 39D / Ttc39d
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: E3
Gene start: 80207460
Gene end: 80217936
  
Corresponding Affymetrix probe sets: 10447093 (MoGene1.0st)   1422236_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000053781
Ensembl peptide - ENSMUSP00000123158
NCBI entrez gene - 67737     See in Manteia.
MGI - MGI:1914987
RefSeq - NM_026351
RefSeq Peptide - NP_080627
swissprot - Q0VF76
Ensembl - ENSMUSG00000046196
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8BYY4 / Ttc39b / tetratricopeptide repeat domain 39B / Q5VTQ0*ENSMUSG0000003817241
A2ACP1 / Ttc39a / tetratricopeptide repeat domain 39A / Q5SRH9*ENSMUSG0000002855536
Ttc39c / tetratricopeptide repeat domain 39C / Q8N584*ENSMUSG0000002442422


Protein motifs (from Interpro)
Interpro ID Name
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR019412  Inclusion body clearance protein Iml2/Tetratricopeptide repeat protein 39


Gene Ontology (GO)
protein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein bindingprotein binding
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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