ENSMUSG00000052407


Mus musculus

Features
Gene ID: ENSMUSG00000052407
  
Biological name :Ccdc171
  
Synonyms : Ccdc171 / Coiled-coil domain-containing protein 171 / E9Q1U1
  
Possible biological names infered from orthology : coiled-coil domain containing 171 / Q6TFL3
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: C3
Gene start: 83525545
Gene end: 83864670
  
Corresponding Affymetrix probe sets: 10505643 (MoGene1.0st)   1430298_at (Mouse Genome 430 2.0 Array)   1459046_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000138195
Ensembl peptide - ENSMUSP00000056520
Ensembl peptide - ENSMUSP00000116486
NCBI entrez gene - 320226     See in Manteia.
MGI - MGI:1922152
RefSeq - XM_006537994
RefSeq - XM_006537990
RefSeq - XM_006537991
RefSeq - XM_006537992
RefSeq - XM_006537993
RefSeq - NM_001081012
RefSeq - XM_006537988
RefSeq - XM_006537989
RefSeq Peptide - NP_001074481
swissprot - E9Q1U1
swissprot - A2BI14
swissprot - S4R1F3
Ensembl - ENSMUSG00000052407
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc171ENSDARG00000027381Danio rerio
 CCDC171ENSGALG00000015103Gallus gallus
 Q6TFL3ENSG00000164989Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002491 decreased IgD "less than normal immunoglobulin class D level" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Ptentm1Rps/Pten+
Genetic Background: involves: 129S1/Sv * 129S1/SvImJ * C57BL/6J

Allelic Composition: Ccdc171m1Anu/Ccdc171+
Genetic Background: C57BL/NCrlAnu-Ccdc171m1Anu/Anu

 MP:0002494 increased IgM "greater than normal immunoglobulin class M level" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Ptentm1Rps/Pten+
Genetic Background: involves: 129S1/Sv * 129S1/SvImJ * C57BL/6J

Allelic Composition: Ccdc171m1Anu/Ccdc171+
Genetic Background: C57BL/NCrlAnu-Ccdc171m1Anu/Anu

 MP:0008211 decreased mature B cell number "reduced number of the mature form of B cells, a type of lymphocyte whose defining characteristic is the expression of an immunoglobulin complex" [CL:0000785, ISBN:0781735149]
Show

Allelic Composition: Ptentm1Rps/Pten+
Genetic Background: involves: 129S1/Sv * 129S1/SvImJ * C57BL/6J

Allelic Composition: Ccdc171m1Anu/Ccdc171+
Genetic Background: C57BL/NCrlAnu-Ccdc171m1Anu/Anu

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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