ENSMUSG00000056643


Mus musculus

Features
Gene ID: ENSMUSG00000056643
  
Biological name :Chst13
  
Synonyms : carbohydrate (chondroitin 4) sulfotransferase 13 / Chst13
  
Possible biological names infered from orthology : carbohydrate sulfotransferase 13 / Q8NET6
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: D1
Gene start: 90308349
Gene end: 90325185
  
Corresponding Affymetrix probe sets: 10546244 (MoGene1.0st)   1453462_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000064897
NCBI entrez gene - 71797     See in Manteia.
MGI - MGI:1919047
RefSeq - NM_027928
RefSeq Peptide - NP_082204
swissprot - D3Z6E3
Ensembl - ENSMUSG00000056643
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST13ENSDARG00000004018Danio rerio
 CHST13ENSGALG00000029632Gallus gallus
 CHST13ENSG00000180767Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Chst11 / Q9JME2 / Carbohydrate sulfotransferase 11 / Q9NPF2*ENSMUSG0000003461246
Chst12 / Q99LL3 / Carbohydrate sulfotransferase 12 / Q9NRB3*ENSMUSG0000003659936
Chst8 / Q8BQ86 / Carbohydrate sulfotransferase 8 / Q9H2A9*ENSMUSG0000006040235
Chst14 / Q80V53 / Carbohydrate sulfotransferase 14 / Q8NCH0*ENSMUSG0000007491634
Chst9 / Q76EC5 / Carbohydrate sulfotransferase 9 / Q7L1S5*ENSMUSG0000004716131
Chst10 / carbohydrate sulfotransferase 10 / O43529*ENSMUSG0000002608027


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR018011  Carbohydrate sulfotransferase 8-10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0016051 carbohydrate biosynthetic process IEA
 biological_processGO:0030206 chondroitin sulfate biosynthetic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0001537 N-acetylgalactosamine 4-O-sulfotransferase activity IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0047756 chondroitin 4-sulfotransferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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