ENSDARG00000004018


Danio rerio
sulfotransferaseCHST13processgolgimembraneactivity-metabolicbiosyntheticapparatusintegralcomponenttransferasechondroitinsulfatebiosynthesis

Features
Gene ID: ENSDARG00000004018
  
Biological name :CHST13
  
Synonyms : CHST13 / si:ch211-236h17.3
  
Possible biological names infered from orthology : carbohydrate (chondroitin 4) sulfotransferase 13 / carbohydrate sulfotransferase 13 / Q8NET6
  
Species: Danio rerio
  
Chr. number: 23
Strand: 1
Band:
Gene start: 34990693
Gene end: 35025117
  
Corresponding Affymetrix probe sets: Dr.12029.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000005165
NCBI entrez gene - 565671     See in Manteia.
swissprot - E7EXM4
ZFIN ID - ZDB-GENE-030131-738
Ensembl - ENSDARG00000004018
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST13ENSGALG00000029632Gallus gallus
 CHST13ENSG00000180767Homo sapiens
 Chst13ENSMUSG00000056643Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
chst11 / carbohydrate (chondroitin 4) sulfotransferase 11 / Q9JME2* / Q9NPF2* / carbohydrate sulfotransferase 11*ENSDARG0000003437559
chst12b / carbohydrate (chondroitin 4) sulfotransferase 12bENSDARG0000007719837
chst12a / carbohydrate (chondroitin 4) sulfotransferase 12a / CHST12* / Q99LL3* / Q9NRB3* / carbohydrate sulfotransferase 12*ENSDARG0000002878636
si:dkey-26i13.7ENSDARG0000009224235
chst12b / si:dkey-26i13.4ENSDARG0000009498135
si:dkey-26i13.6 / si:dkey-26i13.7ENSDARG0000009220034
si:dkey-26i13.5ENSDARG0000009363634
si:dkey-26i13.3ENSDARG0000009548234
chst14 / Q805E5 / carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 / Q80V53* / Q8NCH0* / carbohydrate sulfotransferase 14*ENSDARG0000004301132
si:ch211-269c21.2 / CHST8* / Q9H2A9* / carbohydrate sulfotransferase 8*ENSDARG0000007456032
chst10 / Q6AXM1 / carbohydrate sulfotransferase 10 / O43529*ENSDARG0000003163230


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR018011  Carbohydrate sulfotransferase 8-10


Gene Ontology (GO)
primary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processorganic substance metabolic processbiosynthetic processprimary metabolic processprimary metabolic processorganic substance metabolic processorganic substance metabolic processbiosynthetic processbiosynthetic process
transferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activitytransferase activity
cellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellmembraneorganellecellcellmembranemembraneorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0016051 carbohydrate biosynthetic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Chondroitin sulfate biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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