ENSDARG00000031632


Danio rerio

Features
Gene ID: ENSDARG00000031632
  
Biological name :chst10
  
Synonyms : carbohydrate sulfotransferase 10 / chst10 / Q6AXM1
  
Possible biological names infered from orthology : O43529
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 28031697
Gene end: 28047242
  
Corresponding Affymetrix probe sets: Dr.11834.1.A1_at (Zebrafish Array)   NM_001003779_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000124388
Ensembl peptide - ENSDARP00000124712
Ensembl peptide - ENSDARP00000125022
Ensembl peptide - ENSDARP00000151627
Ensembl peptide - ENSDARP00000047210
NCBI entrez gene - 445322     See in Manteia.
RefSeq - XM_005159892
RefSeq - NM_001003779
RefSeq Peptide - NP_001003779
swissprot - F8W3J4
swissprot - F8W2J0
swissprot - F8W5P5
swissprot - Q6AXM1
ZFIN ID - ZDB-GENE-040808-40
Ensembl - ENSDARG00000031632
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CHST10ENSGALG00000016769Gallus gallus
 CHST10ENSG00000115526Homo sapiens
 Chst10ENSMUSG00000026080Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CHST13 / si:ch211-236h17.3 / Q8NET6* / carbohydrate sulfotransferase 13* / carbohydrate (chondroitin 4) sulfotransferase 13*ENSDARG0000000401828
si:ch211-269c21.2 / CHST8* / Q9H2A9* / carbohydrate sulfotransferase 8*ENSDARG0000007456028
chst12a / carbohydrate (chondroitin 4) sulfotransferase 12a / CHST12* / Q99LL3* / Q9NRB3* / carbohydrate sulfotransferase 12*ENSDARG0000002878627
chst11 / carbohydrate (chondroitin 4) sulfotransferase 11 / Q9JME2* / Q9NPF2* / carbohydrate sulfotransferase 11*ENSDARG0000003437527
chst14 / Q805E5 / carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 / Q80V53* / Q8NCH0* / carbohydrate sulfotransferase 14*ENSDARG0000004301127
chst12b / si:dkey-26i13.4ENSDARG0000009498126
si:dkey-26i13.6 / si:dkey-26i13.7ENSDARG0000009220025
si:dkey-26i13.5ENSDARG0000009363625
si:dkey-26i13.3ENSDARG0000009548225
chst12b / carbohydrate (chondroitin 4) sulfotransferase 12bENSDARG0000007719824
si:dkey-26i13.7ENSDARG0000009224224


Protein motifs (from Interpro)
Interpro ID Name
 IPR005331  Sulfotransferase
 IPR018011  Carbohydrate sulfotransferase 8-10


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0016051 carbohydrate biosynthetic process IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0008146 sulfotransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
Reactions specific to the complex N-glycan synthesis pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr