ENSMUSG00000058328


Mus musculus

Features
Gene ID: ENSMUSG00000058328
  
Biological name :Xlr5a
  
Synonyms : X-linked lymphocyte-regulated 5A / Xlr5a
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: X
Strand: -1
Band: A7.3
Gene start: 73107635
Gene end: 73292976
  
Corresponding Affymetrix probe sets: 10605018 (MoGene1.0st)   10605044 (MoGene1.0st)   1422933_at (Mouse Genome 430 2.0 Array)   1443483_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000137006
Ensembl peptide - ENSMUSP00000077650
Ensembl peptide - ENSMUSP00000110166
Ensembl peptide - ENSMUSP00000110167
NCBI entrez gene - 574438     See in Manteia.
MGI - MGI:3574108
RefSeq - XM_011247654
RefSeq - XM_006528210
RefSeq - XM_011247652
RefSeq - XM_011247653
RefSeq - NM_001045539
RefSeq - XM_006528206
RefSeq - XM_006528207
RefSeq - XM_006528208
RefSeq - XM_006528209
RefSeq Peptide - NP_001039004
swissprot - A2BI46
swissprot - A2BI45
Ensembl - ENSMUSG00000058328
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sycp3ENSDARG00000013438Danio rerio
 SYCP3ENSGALG00000012766Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Xlr5b / X-linked lymphocyte-regulated 5BENSMUSG0000007247996
Xlr5c / X-linked lymphocyte-regulated 5CENSMUSG0000006776474
Gm14692ENSMUSG0000007957729
Gm1140ENSMUSG0000007957829
Sycp3 / synaptonemal complex protein 3 / Q8IZU3*ENSMUSG0000002005927
Gm28919ENSMUSG0000010124315
3830403N18Rik / RIKEN cDNA 3830403N18 geneENSMUSG0000003112514
Xlr / P05531 / X-linked lymphocyte-regulatedENSMUSG0000005462614
1700013H16Rik / RIKEN cDNA 1700013H16 geneENSMUSG0000005472714
Gm773 / predicted gene 773ENSMUSG0000007317714
Gm20736ENSMUSG0000009399314
Gm29554ENSMUSG0000010023114
Gm28510ENSMUSG0000010139614
Gm21865ENSMUSG0000009389513
Gm21477ENSMUSG0000009439913
Gm20931ENSMUSG0000009457013
Gm20888ENSMUSG0000009461613
Gm21650ENSMUSG0000009464713
Gm20916ENSMUSG0000009474613
Gm21518ENSMUSG0000009482113


Protein motifs (from Interpro)
Interpro ID Name
 IPR006888  XLR/SYCP3/FAM9 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051321 meiotic cell cycle IBA
 cellular_componentGO:0000800 lateral element IBA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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